Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00081 ATGGCGGCTGGTAGACATGGAGGTTATCGTGACAACGAGTTTAGGGACCGTGAGTCCAATTTTGATGTTTCAAGGCGGGTTTTTAATAATAATTCTAGACAAGAGTATGATAGTATGACGAATGGTAGCCGCGATGTTGTGAGGGTTGGGAGCAAGGATGCAAGAGATAGGATTAGACTGAGGCAGAAAGATATTAGGGAGAGGGAAGCTCCAAATGGTAGCTATTTGAGTAAGAGTGACTCTGGCGGTAGCGGCGGTTGTAGTTGTGGATTTGGTCCCAGAAGATGTGGGTTTTCTGTTAAGACTATGGATAGAGAGCCGGGTGAGCTTTCTAGTGAGAGTGGGTCCGATGATGATGGTATTGAATCAGGATCACAGGAAAAATACTGTGAGGTTGCAACAAGTGAAGGAAACTGTGCACGATCTCCGCTAGAGAGGAAAAGAAAATTTTCTCCAATAGTATGGGATCAGGATGACAACGAAGTCAATAATTTATCCAAACTCAGGGTTGTCACAGCAGTGACTACTCTGCCTCCACTTCCAAGAGTCCGTCTGTCACCTAATGTTCCGGATAGAGGAGTTGAAACTCATCCTGTCAAACACACAGAGGCTGAGATTCTTGAGTTACCAACTGTAACTAATCCTCCTTTGCTGTCTGAGTCAGATCAGGATGCTGAGTCTGAGTCTCCTGTTGGTTTGCATTCATTGTTGCCAGATCAGGAAGCCAAGCGACCTGAAGGTGAAGATTATATTCCAACTCATAACATATCATCTTCAAGATGGGCTGCTGGAGATAACTCTCCTGGTGATGAAGGTGAAATAAATGATGACAAGGAAATCCTTAAGAGGAGGAAGCTATCTCCTGAGCTGGGTATGAGAGTAAGAAACAGGATGTCAAGACTAGAGGAATCTAACATAGAAGATTTTGTAGGAGCTAGAGCCAAATCATCCGAATCTAAAGAAAGAGGTAGCCGTGGGAGATTATCCAGTGGAGATTATTGTCCTGGTAACATGTCAAGGAAGGATGATTATATGGAGATTGATGGTCAAGGTAGCAGAAGTGAAGCTAGTGGTTATCATTCAGATACAGATTTGGAAGATGATAGCAGAGAAACTTCTGAACCTCCGGTTCCACCACAAAGAGTTGCCAACATGCTTCAGGGTtgtagaagtgttgatgagtttgagagactgaacaagatagatgaaggaacatatggtgtcgtgtttagggccaaagataagaagactgatgaaattgtggcattgaaaaaggtgaagatggagaaggaaaaagaaggttttccactgacttctctcagggaaataaacattcttctttcctttcaccacccatccatagttgatgttaaagaagtagtggtaggaagtaaccttgatagtattttcatggttatggaatacatggaacatgatcttaaaggactaatggaggcaatgaagcagccctttagccagagtgaagtaaagtgcttaatgctccagcttttagaaggtgtgaagtatcttcatggcaactgggtgcttcatagggatttgaagacttctaacctccttctgaataataggggtgagttaaaaatttgtgattttggattggctcgtcaatatgggagcccattgaaaccatatacacacctggtggttactctttggtacagggctcctgaacttcttctcgggacaaaacagtattcaacagccattgacatgtggtctctgggttgtataatggctgagctattgtccaaggaaccactgtttaatgggaggactgaatttgaacaacttgacaagattttcagaattcttggcacaccaaatgaaacaatttggcctggTTCCTCTGTTCTTATTTTTTTGTCACTGTTTTCCCAGGCTTTCAACTCTGGGTGGTTCTGgtataatctcctgcacaaaaaatttcctgcaacatcagtcaccggatcgccagttctttctgattctggatttgatttgttgaacaagcttctaacttatgaccctgtaaagcggatcacggctgaagaagctctaaaccatgagtggtttcgtgaagttccccttccgaagtctaaagaatttatgcctacattccctgctcaacatgctcaggacagGCGAATGAGGAAAATATTAAAGAGTCCAGATCCATTAGCAAAGCAACACTGGAAGGAGATGCAGCAGGGTGAATCAGGGACTGGTGTTGAAGAAAATGACAGTAACTTTTTAATTCCAAGTATCAAAGCTAGCAGGTTGAGGATGTTACCTGTATACCTGGAATATATGGAACTTTGTTCCATCAGGCTCTCTAGAGCTGTTGAAAAAACATCAAATCCTGCACCTGTGAAGGCGGTGAGGTGA 2385 0.2683 MAAGRHGGYRDNEFRDRESNFDVSRRVFNNNSRQEYDSMTNGSRDVVRVGSKDARDRIRLRQKDIREREAPNGSYLSKSDSGGSGGCSCGFGPRRCGFSVKTMDREPGELSSESGSDDDGIESGSQEKYCEVATSEGNCARSPLERKRKFSPIVWDQDDNEVNNLSKLRVVTAVTTLPPLPRVRLSPNVPDRGVETHPVKHTEAEILELPTVTNPPLLSESDQDAESESPVGLHSLLPDQEAKRPEGEDYIPTHNISSSRWAAGDNSPGDEGEINDDKEILKRRKLSPELGMRVRNRMSRLEESNIEDFVGARAKSSESKERGSRGRLSSGDYCPGNMSRKDDYMEIDGQGSRSEASGYHSDTDLEDDSRETSEPPVPPQRVANMLQGCRSVDEFERLNKIDEGTYGVVFRAKDKKTDEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHGNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFEQLDKIFRILGTPNETIWPGSSVLIFLSLFSQAFNSGWFWYNLLHKKFPATSVTGSPVLSDSGFDLLNKLLTYDPVKRITAEEALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRKILKSPDPLAKQHWKEMQQGESGTGVEENDSNFLIPSIKASRLRMLPVYLEYMELCSIRLSRAVEKTSNPAPVKAVR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00081 794 ProSiteProfiles Protein kinase domain profile. 395 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00081 794 MobiDBLite consensus disorder prediction 98 128 - -
Gma18g00081 794 Pfam Protein kinase domain 395 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00081 794 MobiDBLite consensus disorder prediction 1 85 - -
Gma18g00081 794 MobiDBLite consensus disorder prediction 24 45 - -
Gma18g00081 794 MobiDBLite consensus disorder prediction 271 327 - -
Gma18g00081 794 Gene3D Phosphorylase Kinase; domain 1 380 477 - -
Gma18g00081 794 SMART serkin_6 395 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00081 794 Coils Coil 413 433 - -
Gma18g00081 794 MobiDBLite consensus disorder prediction 48 73 - -
Gma18g00081 794 MobiDBLite consensus disorder prediction 359 374 - -
Gma18g00081 794 SUPERFAMILY Protein kinase-like (PK-like) 387 697 IPR011009 -
Gma18g00081 794 Gene3D Transferase(Phosphotransferase) domain 1 478 736 - -
Gma18g00081 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Gma18g00081 794 MobiDBLite consensus disorder prediction 214 228 - -
Gma18g00081 794 CDD STKc_CDC2L1 389 691 IPR045267 GO:0004674|GO:0005524|GO:0006468
Gma18g00081 794 PANTHER - 116 742 - -
Gma18g00081 794 MobiDBLite consensus disorder prediction 8 23 - -
Gma18g00081 794 MobiDBLite consensus disorder prediction 180 381 - -
Gma18g00081 794 PANTHER CELL DIVISION PROTEIN KINASE 116 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00081 Gma-Chr18 642729 651091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00081 386 718 Core Cell Cycle Gene Families AT5G10270 43.875 5.44e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gma18g00081 Pkinase 6.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00081 K08818 - gmx:100793729 1266.52