Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g00066 | ATGGTTATGGCGGAGGAAGAAGAAAGCGGAGTATCGATACAACTGGAATTCCCGAAGGGTCGGGTGAAGAAGATTATGGCGCTGGACAAAGACGTGAAGAGGGTGAGCTCAGAAGCGTTGTTTCTGGTGTCGCGCTCCACGGAATTATTCCTCCAATTCCTGGCTGAAAAATCGGCGCAGGTTGCGATTGAAAAGAAACGGAAGACCGTGAATCTGGAACATATAAGAGAGGCCGTGAAGAGGCACCAGCCAACCAGGGATTTTCTCCTCGATGAGCTTCCGCCGCCATCTCAGCCCACCAAGCCCGATAGGCCCACTCAGCCTGCCGGTCGGCCCAAATTGGATCCTCCTCCCCGTGGTACTCGCCGCATCGATCTATTTTTCCGGAAACCAGAACTTGACGACccagcccaagcccaaccacctgaaaatccagctcaagctcaaccgcctgaaaatccagaccaagaccaaGCCCAATCGCCAGTACCCGTAGATGAGTCTTAG | 507 | 0.4635 | MVMAEEEESGVSIQLEFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIREAVKRHQPTRDFLLDELPPPSQPTKPDRPTQPAGRPKLDPPPRGTRRIDLFFRKPELDDPAQAQPPENPAQAQPPENPDQDQAQSPVPVDES | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g00066 | 168 | MobiDBLite | consensus disorder prediction | 78 | 168 | - | - | |
Gma18g00066 | 168 | MobiDBLite | consensus disorder prediction | 95 | 115 | - | - | |
Gma18g00066 | 168 | MobiDBLite | consensus disorder prediction | 116 | 132 | - | - | |
Gma18g00066 | 168 | Gene3D | Histone, subunit A | 1 | 94 | IPR009072 | GO:0046982 | |
Gma18g00066 | 168 | PANTHER | NUCLEAR FACTOR Y, SUBUNIT C13 | 5 | 132 | - | - | |
Gma18g00066 | 168 | SUPERFAMILY | Histone-fold | 15 | 82 | IPR009072 | GO:0046982 | |
Gma18g00066 | 168 | MobiDBLite | consensus disorder prediction | 150 | 168 | - | - | |
Gma18g00066 | 168 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 16 | 79 | IPR003958 | - | |
Gma18g00066 | 168 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 5 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g00066 | Gma-Chr18 | 531588 | 532325 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g00066 | 6 | 130 | CCAAT-HAP5 Transcription Factor Family | AT5G43250 | 64.800 | 2.13e-48 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Gma18g00066 | CBFD_NFYB_HMF | 2.4e-19 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma18g00066 | - | - | gmx:100793004 | 303.523 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g00066 | 18 | 531588 | 532325 | Gma18g00066 | 18 | 531588 | 532325 | ECH | |
Gma18g00066 | 18 | 531588 | 532325 | Gma11g02514 | 11 | 40281504 | 40282016 | GST |