Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00046 ATGTGGGGCAAGATATTGAAATCCATAAGGAAAAGTCTCATAAGCCTTCAACAGAAGTGTATGAATTCTCGAAAGAGTGAAGTTGATAGTAGTGTGTCAGTGCATGGTGTGCAGTGGGCAAATTGCAATTGTTGCATAGAGGAAAGCAATTGTGACCACATTAATGCCGCAGAAGGCGCAAGTAATGTCGACGCCCAGCGTGATGCTAACGCCAACAGTTCTTTCACTCATGCTGTCATTAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTGTAGAAAATGGAGGGTGGTCATCTGCATTCTTGCTTATGGGACTAGGGATGATGTGTGCTTATAGTTCTCACATACTTGGAATATGCCTTAGAAAGAATCCCAAGTTAACAAGTTTCGTGGATATTGGGAAGCATGCATTTGGATCAAAAGGAAGAAACGTGGCTGCAACAATCATCTACATGGAAATCTTCATGGCCCTCGTTTCCTACACCATCTCACTACATGATAATTTGACCACAGTCTTTTTGGGGACAAATTTGAATCTGCACTTGCCTAACTTTTCTTCATCCCAGCTCCTAACCGTGGTGGCAGTCTTGATTGCCATGCCTAGTTTGTGGATCAGAGACCTTTCTTCCATATCTTTCCTTTCAAGTGTTGGCATTCTCATGTCTCTGCTCATTTTCCTGTGTGTAGCAGCCACTGCACTCTTAGGATATGTCCAATCTAATCATACCATACCTGTCCTCCACCTCCATAATATTCCATCCGTATCTGGCCTTTACGTTTTCGGCTATGGAGGACATATTGTTTTCCCTGAATTATATACAGCCATGAAAGACCCCTCCAAATTTACCAAGGTTTCTATAGTGAGCTTCGCGGTAGTTACAGCAATTTACACGACATTGGGGTTCATGGGTGCGAAGATGTTTGGTAAGGATGTGAAGTCTCAGATCACACTTAGCATGGCACCGGAGCACATCGTAACAAAGATTGCTCTGTGGGCAACCGTGGTGGCACCCATGACCAAATATGCGCTTGAATTCACCCCATTTGCAATTCAACTAGAGCATGCACTTCCAAGTTCCATGAGTGCCAGGACCAAAACGATAATTAGAGGCTGCATAGGTTCATTTTCACTTTTGGTCATACTAACCCTTGCTCTCTCGGTTCCATATTTTGAGCATGTACTAAGTCTCACTGGTTCCCTTGTTAGTGTTGCCGTTTGTTTAATTTTGCCTTGTGCTTTCTACGTTAAGATATGTTGGGGTCAGATATCAAAGCCTCTCTTACTCCTAAACCTCTTTCTCATCATATTCGGCTTTGTTCTTGCCGTGATGGGCACCATTTCCTCCTCACAGTTACTACTCAAAAATCTTCAATCACATAACTTGAGGCACAAGGAATGA 1419 0.4341 MWGKILKSIRKSLISLQQKCMNSRKSEVDSSVSVHGVQWANCNCCIEESNCDHINAAEGASNVDAQRDANANSSFTHAVINMVGMLIGLGQLSTPYAVENGGWSSAFLLMGLGMMCAYSSHILGICLRKNPKLTSFVDIGKHAFGSKGRNVAATIIYMEIFMALVSYTISLHDNLTTVFLGTNLNLHLPNFSSSQLLTVVAVLIAMPSLWIRDLSSISFLSSVGILMSLLIFLCVAATALLGYVQSNHTIPVLHLHNIPSVSGLYVFGYGGHIVFPELYTAMKDPSKFTKVSIVSFAVVTAIYTTLGFMGAKMFGKDVKSQITLSMAPEHIVTKIALWATVVAPMTKYALEFTPFAIQLEHALPSSMSARTKTIIRGCIGSFSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCAFYVKICWGQISKPLLLLNLFLIIFGFVLAVMGTISSSQLLLKNLQSHNLRHKE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00046 472 PANTHER AMINO ACID TRANSPORTER AVT1H 55 465 - -
Gma18g00046 472 Pfam Transmembrane amino acid transporter protein 72 454 IPR013057 -
Gma18g00046 472 PANTHER OS05G0424000 PROTEIN-RELATED 55 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00046 Gma-Chr18 374792 377976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00046 42 463 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.563 6.10e-166 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00046 - - gmx:100790897 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00046 18 374792 377976 Gma11g02535 11 40458141 40461584 GST