Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00019 ATGAGAATGTTGCCTGTTTGCTCAGCCACCCCACGTTATTCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCCATTCGAAAGGATCTTGAGAGCAGATGTGTGGCTGAAGAAGGTGTGCATTTGGCTTCACAATATGGAACTCATTCACTGAGAAATTCATTTGCAGTGCAAGCTACAAAGACAGTATTGGGTAGTTTTTCTTCTACAAGTGAACTGGGATACCTTACAAGCACGTGGGATTATTTACCAGTGACAACAGATGGGCATCATTCTCTGAGTGATGGGGAAGTCAGACACATGGAATATTATCATCTATCTACTGTGCCTGATGAATTTGCAGATTTTGCAGAACAGGTAACTGAAGGATCTAACACATTAGTGACACCAGCACAACCAGAAACACTATCGACTGCCGATATAATGCCAGAGAACTTTGCACCAAGTCCTAGTTCAATTAATGTGGACAATGAATCATTAGTCAGTACAAAAGCAAGTGTTGGAGACCTTGTTGCCGGAATCAATGAATCATTCAGTGCCTCAATCAATAAGGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCTACTTCTTTTGTAGATTCTATTGTTAAAACTGCTACTAAATCTGTAGATAATGCTTTTAGTAAGGCATTTTCTTCTGTTGATCAAACAGGGGAATTAACAAATAAGAAGTTAACCAGCTTTTCAAGTGAGCTGACTGGAGTCACAAATAAAGCACCTGCTGTGGCTATTGATGTGTTGCGCCGCACAATTATAGTTGTAGAGAGTTCTCTAACAAGTGGGGCTTCATATGTTTTCTACCTATATGGCTCAGCAAAGGAGCTCCTTCCAGCAGGAATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCAGTTGGGTCTGCAACTCAAAGGTTATACATGGCTGTCTATTCATTGGAGaagagtcttggcttggatccaaatgacccaatcattccatttgTTGTTCTTTTAGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAGATTTGTCCCCTAAATCAGCTTTTGAGCTTTTGGCCGAGGATGCAAATGCTGCACTTATTGATGTCCGTTCTGAGGCAAAAAAATATGGCATTCCTGATCTCCGACGGGCTGCTAGGTTTCGTTATGCAAGTATAACTCCTCTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTAGAGAACTTGATGATTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATGGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGCTCAAGAATCCATACTTGGTTCAAGGTGGCTTTCAGTCTTGGATGCAACAAGGTCTCCGCATCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTGGGCAACTTTTAGGTTATGGTACAGTAAGTCACAATCAATTTGTCTCAGAATGGGAGAAGACATTACAGTTGATTGGTGCTTTTGGCCTCGGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAAGTCAGAAGATCTAAAACAAGATGTGAGGTTGTTGCTTTCTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGCTTAGGATTACCTACATCACCGTCATCATCAGATGTTCAGAACCGGGTGTTGCAGGCTGCTGCCAAACATGAATCCCAACCATCCGATAGTGAAGGTAACCAAGATCCAGTACCTGAACCGACAGTTCCTCTCAATCAGAATGTATGA 1920 0.4125 MRMLPVCSATPRYSTSSQIPLFGGLHPIRKDLESRCVAEEGVHLASQYGTHSLRNSFAVQATKTVLGSFSSTSELGYLTSTWDYLPVTTDGHHSLSDGEVRHMEYYHLSTVPDEFADFAEQVTEGSNTLVTPAQPETLSTADIMPENFAPSPSSINVDNESLVSTKASVGDLVAGINESFSASINKGENALRSSLDTATSFVDSIVKTATKSVDNAFSKAFSSVDQTGELTNKKLTSFSSELTGVTNKAPAVAIDVLRRTIIVVESSLTSGASYVFYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRLYMAVYSLEKSLGLDPNDPIIPFVVLLGSSATLWAFYWLWTYGGYSGDLSPKSAFELLAEDANAALIDVRSEAKKYGIPDLRRAARFRYASITPLEVDGSIRKLLKSGRELDDSLIAAIIRNLKMVKDSSRVIVLDADGTRSKGIARSLRKIGLKNPYLVQGGFQSWMQQGLRIKELKPETALSILNEEAEAILEDVSPSPGQLLGYGTVSHNQFVSEWEKTLQLIGAFGLGLTIYLRVSSYEKSEDLKQDVRLLLSPVRLGAQAFSWAAGKLESNGLGLPTSPSSSDVQNRVLQAAAKHESQPSDSEGNQDPVPEPTVPLNQNV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00019 639 Gene3D - 359 511 IPR036873 -
Gma18g00019 639 Pfam Rhodanese-like domain 370 482 IPR001763 -
Gma18g00019 639 ProSiteProfiles Rhodanese domain profile. 374 490 IPR001763 -
Gma18g00019 639 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 638 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gma18g00019 639 MobiDBLite consensus disorder prediction 593 639 - -
Gma18g00019 639 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 347 488 IPR036873 -
Gma18g00019 639 SMART rhod_4 364 487 IPR001763 -
Gma18g00019 639 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00019 Gma-Chr18 154469 162614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00019 336 451 Sulfurtransferasese or Rhodanese AT5G23060 28.571 3.10e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00019 - - gmx:100786123 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00019 18 154469 162614 Gma11g02561 11 40647373 40655567 GST