Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02500 atgcgttcagcgtgcactttccttgagaatccaccactttcAGTATATAACTACATCATTAATCCAGTCATTCGGGCAGCAATGGATGAGGATATTAAAGGAGCCATAGTTATTCTTGACGAAGCTCACAATATAGAGGACATTGCTCGTGATGTTGGCAGTGTGGATATTGAAGAAGATGTTTTGGATATGAGTGCTGCATTTGTGCAGGACCTTACTAGTTGGATGGAACAAAAGAAAAACAAGCTAGAAAAACGTGATTTTCAGCACTATGTGGCAATCAAAGTTGCTACAGACTCGGAGACAGATACTGCAAATAAGTGCCATGTCAGTGATAACTTTGGAAGAAATGGATCTCACATGTTGGATTACCAGCTTGCTCTTCAGCGATGCGTTAGAAACGATACTGATATGAACTCGACACTTTCAACCAGCTTTTCTATCATAATTGGTGTAATTATTCTTGTGGAATTAATAGATGAACGCTTTCGGGAAGAAAGAAATAGGGCATTCATTTCAAAGTGGCTAAGAAGACCGTTGAGAGTATATGAAAACTTTGATTTGTCATTGGAGGGACTAAAATCTTTCTTTGAGAATGCCAAGGAACATTATGGCATAAATACAGTACGTGCCACACAGAGTTTGGGTTTAAATGGGGATGTCGTCCAAAACAAGGATCAGAATGCATGGTTCACAAGAAAGAAAAAACAGAAGCTGAACAAGTCTGGTAATGGAGATGGGAGAGAAACATCAGTGATTGAGAATAACATCTCTTTTCCCACACTAACCTCTCCAGATCTTATTGAGAGTCAGCCATCAGCTCAAAAGAATAGTAACACATACAATTGTAAATATCTCCCTCAATGCAGTAATCAGACAGAGCCAAGGTTTTGA 894 0.3702 MRSACTFLENPPLSVYNYIINPVIRAAMDEDIKGAIVILDEAHNIEDIARDVGSVDIEEDVLDMSAAFVQDLTSWMEQKKNKLEKRDFQHYVAIKVATDSETDTANKCHVSDNFGRNGSHMLDYQLALQRCVRNDTDMNSTLSTSFSIIIGVIILVELIDERFREERNRAFISKWLRRPLRVYENFDLSLEGLKSFFENAKEHYGINTVRATQSLGLNGDVVQNKDQNAWFTRKKKQKLNKSGNGDGRETSVIENNISFPTLTSPDLIESQPSAQKNSNTYNCKYLPQCSNQTEPRF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02500 297 PANTHER FANCONI ANEMIA GROUP J PROTEIN 158 279 - -
Gma17g02500 297 PANTHER FANCONI ANEMIA GROUP J PROTEIN 15 98 - -
Gma17g02500 297 Gene3D - 13 93 IPR027417 -
Gma17g02500 297 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 1 93 IPR014013 GO:0005524
Gma17g02500 297 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 35 44 IPR002464 -
Gma17g02500 297 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 158 279 IPR045028 -
Gma17g02500 297 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 15 98 IPR045028 -
Gma17g02500 297 Pfam DEAD_2 15 61 IPR010614 GO:0003677|GO:0003678|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02500 Gma-Chr17 43005128 43011643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02500 K15362 - gsj:114394262 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02500 17 43005128 43011643 Gma17g02500 17 43005128 43011643 ECH