Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02496 ATGACGCTCAACATAGCGGCTTTGGCTGTGTTGTGTATTTCTGTCTTTGGCATCGCTGTGGTGGCTGAAGATCCATATAGGTTCTTCACCTGGAATGTTACATACGGAGACATTTATCCACTTGGTGTTCGCCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGACCAGCCATTTCTCCTCTCCTGGAACGGAGTCCAGCAGAGAAGGAACTCATTCGAAGATGGGGTATTGGGAACAACATGCCCCATCCCAGCAGGAGGGAACTTCACATACATACTTCAAGTGAAGGATCAAATTGGAAGCTTCTACTACTTCCCATCCCTTGCATTCCACAAAGCTGCTGGTGGTTTTGGAGGCATTAGGATTTTGAGCAGGCCTAGAATTCCAGTTCCTTTCGATGATCCTGCCGGTGATTACACTGTCCTCATTGGAGATTGGTACAAGCTCAACCACACGGATTTGAAGTCTCAGCTTGATAGCGGTAGGAAGCTGCCTTTACCTGATGGAATCCTAATCAATGGTCGTGGCTCTAATGGAGCATATTTAAATGTGGAACAAGgaaagacttacaggcttagaatatcaaatgtggggttggaaaattcgctgaacttgcgcatacaaaaccacaaattaaagctggtggaagtggaagggacacacacccttcaaactacgtactcatcccttgacgtccacgtgggccaatcttactcagttctggtaactgcggatcaacctgctcaggactactacattgtggtctcctctCGATTTACCTCCACAGTTCTCACCACCACCGGAATTCTGCGCTATAGCAACTCTGCAGGCCCAGTTTCAGGCCCACCCCCTGGTGGACCTACCATCCAAATTGATTGGTCTTTGAACCAGGCCCGCTCCATCAGGACCAACCTCACAGCAAGTGGGCCTAGGCCCAACCCGCAAGGCTCCTACCATTACGGTCTCATAAACACAACCAGGACCATCATACTGTCGGGTTCACCAGGTATAGTGAATGGCAAACAAAGATACGCAATTAATAGCGTGTCTTACGTTGCTCCGGACACTCCTCTTAAGCTCGCCGACTACTTCAAAATCCCTGGCGTTTTCCGTGTGGGAAGCATTTCTGACAGGCCCACTGGCGGTGGCATATACCTTGACACATCTGTGCTGCAAACTGACTACAGAACATTTGTGGAGTTTGTCTTCCAAAATGACGAAGATATCATTCAGAGCTATCATCTCGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAGTGGACACCTGCTAGCAGGAACACGTACAATCTTCGAGATGCAGTTTCGCGGTCCACAACTCAGGTATATCCCAAGTCATGGACTGCTATATATATTGCGCTTGACAACGTGGGAATGTGGAACTTGAGGTCTGAATTTTGGGCACGGCAATACCTTGGCCAACAGTTTTACATGCGCGTTTATACAACATCGACCTCAATCAGAGATGAATATCCTGTTCCGAAGAATGCACTACTTTGTGGTAGGGCAAGTGGGAGACACACTCGACCCCTTTGA 1626 0.4164 MTLNIAALAVLCISVFGIAVVAEDPYRFFTWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSFEDGVLGTTCPIPAGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYKLNHTDLKSQLDSGRKLPLPDGILINGRGSNGAYLNVEQGKTYRLRISNVGLENSLNLRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSTVLTTTGILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTRTIILSGSPGIVNGKQRYAINSVSYVAPDTPLKLADYFKIPGVFRVGSISDRPTGGGIYLDTSVLQTDYRTFVEFVFQNDEDIIQSYHLDGYSFFVVGMDGGQWTPASRNTYNLRDAVSRSTTQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSIRDEYPVPKNALLCGRASGRHTRPL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02496 541 Pfam Multicopper oxidase 378 513 IPR011706 GO:0005507|GO:0016491
Gma17g02496 541 Gene3D - 156 332 IPR008972 -
Gma17g02496 541 SUPERFAMILY Cupredoxins 153 333 IPR008972 -
Gma17g02496 541 PANTHER - 13 534 - -
Gma17g02496 541 Gene3D - 26 147 IPR008972 -
Gma17g02496 541 CDD CuRO_3_AAO_like_1 375 495 IPR034275 GO:0005507
Gma17g02496 541 CDD CuRO_1_AAO_like_1 28 143 IPR034273 GO:0005507
Gma17g02496 541 SUPERFAMILY Cupredoxins 19 173 IPR008972 -
Gma17g02496 541 PANTHER MULTI-COPPER OXIDASE 13 534 IPR045087 -
Gma17g02496 541 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Gma17g02496 541 Pfam Multicopper oxidase 159 295 IPR001117 -
Gma17g02496 541 Gene3D - 342 537 IPR008972 -
Gma17g02496 541 SUPERFAMILY Cupredoxins 343 532 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02496 Gma-Chr17 42969381 42976097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02496 - - gmx:100783077 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02496 17 42969381 42976097 Gma17g02496 17 42969381 42976097 ECH
Gma17g02496 17 42969381 42976097 Gma14g02179 14 52910312 52915517 GST
Gma17g02496 17 42969381 42976097 Gma04g00183 04 1554614 1562708 PCT
Gma17g02496 17 42969381 42976097 Gma06g00173 06 1517343 1524607 PCT
Gma04g00183 04 1554614 1562708 Gma17g02496 17 42969381 42976097 PCT
Gma06g00173 06 1517343 1524607 Gma17g02496 17 42969381 42976097 PCT