Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02495 ATGCATCCAACGCTCTTCCCTTCTCAGATCAACCTGGTGGAGGAACGTGATCAAACCACTCAACAAAGTGATCTCGGTGCAGTTTTGCGTGATGGAAAAGAAATACTTCTTCAGGCATTCAACTGGGAGTCTAACAAATACAACTGGTGGAATAATTTAGAAGGCAAAGTTCCTGACATAGCTAAAGCTGGATTTACTTCAGTCTGGTTGCCGCCACCAACTCACTCCTTCTCACCTGAAGGAGATATTTTCCATGGATTTCCCAATATCGACCATACTAAAGATTTTGTGAGAAAGGATATCATAGGATGGCTCCGTTGGTTGCGCCATGAGGTGGGCTTCCATGATTTTCGATTTGGTTTTGTAAAGGGGTTTTCACCAAAATATGTTAAAGAATATATTGAAGGAGCAAAACCATTATTTTGTGTTGGGGAGTACTGGCATTCTTGCAACTACAAGGGTTCTACCTTGGACTATAACCAAGATAGCCATAGACAGCGACGACTAATCAATTGGATTGATGGCACTGGACAACTTTCAACTGCATTTGACTTTACAACAAAAGGAATTCTCCAGCTGTTAAAGGAGACTTCTGGCGTCTGTGTGATCCTCaagggaagcccccagGCTCATTGGCCCTTCCCAAAAGACCATATCATGGAGTTAAAAAGTTCCAGTATCATTTGTGACGCCGACGAGGAGAGCATGACATCAAGGGAGGATCTGGCTCAAGCTAGGGATCCTAGGTATTCGATCGAGGAGAGCGTGACATCAAGGCATTCAAAGTATATCACCTGTGAGAATTCTGGAGGCCAAGCACGACCTTTACTCTGCAGTAATCTGAGAGAAGGTGTGCATGAAGATTGGAAATGGTTCATGGTGCCCAACTGCGAGGGAATGGACACTATCAACTTCTGGTCACAATTACGCTGTGTGGCACAAGTAGTGTTCTGTTGGCATGACCCTTCTTCTCCACTGGAGTACTCGCAGATAAGAGAAGGGAATTATGAGCTTCTTATATGCTTCTCGATTGAGTCTTAA 1041 0.4323 MHPTLFPSQINLVEERDQTTQQSDLGAVLRDGKEILLQAFNWESNKYNWWNNLEGKVPDIAKAGFTSVWLPPPTHSFSPEGDIFHGFPNIDHTKDFVRKDIIGWLRWLRHEVGFHDFRFGFVKGFSPKYVKEYIEGAKPLFCVGEYWHSCNYKGSTLDYNQDSHRQRRLINWIDGTGQLSTAFDFTTKGILQLLKETSGVCVILKGSPQAHWPFPKDHIMELKSSSIICDADEESMTSREDLAQARDPRYSIEESVTSRHSKYITCENSGGQARPLLCSNLREGVHEDWKWFMVPNCEGMDTINFWSQLRCVAQVVFCWHDPSSPLEYSQIREGNYELLICFSIES 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02495 346 SUPERFAMILY (Trans)glycosidases 42 192 IPR017853 -
Gma17g02495 346 PANTHER ALPHA-AMYLASE 2-RELATED 80 193 - -
Gma17g02495 346 Gene3D Glycosidases 19 79 - -
Gma17g02495 346 Gene3D Glycosidases 80 220 - -
Gma17g02495 346 PANTHER ALPHA-AMYLASE 2-RELATED 29 81 - -
Gma17g02495 346 PANTHER ALPHA-AMYLASE 80 193 - -
Gma17g02495 346 PANTHER ALPHA-AMYLASE 29 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02495 Gma-Chr17 42943192 42947860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02495 17 81 Glycoside Hydrolase AT1G76130 66.154 2.47e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02495 K01176 - gmx:100793671 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02495 17 42943192 42947860 Gma17g02495 17 42943192 42947860 ECH
Gma17g02495 17 42943192 42947860 Gma14g02176 14 52865111 52870790 GST