Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02484 ATGCTCATAACTATGTCCCTGGCTTCTCTTGTGAGTGCACTAAATGTAAATTACTATGAAAATACGTGCCCCCATAATGTAGATTCCATTGTAGCTGCTGCTGTTCACAAAGCAACCATGAATGACAGAACTGTCCCAGCTGCTCTCCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCCTCTGTACTTCTGGAATCAAAAGGTAAGAATAAAGCAGAAAAGGATGGACCTCCTAACATTTCTTTGCATGCATTCTATGTCATTGACAATGCTAAGAAAGCAGTGGAAGCCGTTTTCCCCGGGATCGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTTGCCCTTTCCGGAGGACCCACTTGGGATGTGACAAAAGGAAGAAAGGATGGAAGAATATCAAAGGCCACTGAAACCAGACAACTGCCGGCTCCCACCTTCAACATCTCCCAATTACAACAAAGCTTCTTCCAAAGAGGCCTTTCCTTGGAAGATCTTGTGGCCCTCTCAGATGAGGCTAAATGCCTAAATCCACTGTCAAAAGCAGGAAAATCATGA 579 0.4439 MLITMSLASLVSALNVNYYENTCPHNVDSIVAAAVHKATMNDRTVPAALLRMHFHDCFIRGCDASVLLESKGKNKAEKDGPPNISLHAFYVIDNAKKAVEAVFPGIVSCADILALAARDAVALSGGPTWDVTKGRKDGRISKATETRQLPAPTFNISQLQQSFFQRGLSLEDLVALSDEAKCLNPLSKAGKS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02484 192 Gene3D - 17 149 - -
Gma17g02484 192 Gene3D Peroxidase, domain 2 150 177 - -
Gma17g02484 192 PANTHER PEROXIDASE 25-RELATED 2 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 SUPERFAMILY Heme-dependent peroxidases 14 177 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 ProSiteProfiles Plant heme peroxidase family profile. 13 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g02484 192 PANTHER PEROXIDASE 64 2 178 - -
Gma17g02484 192 Pfam Peroxidase 32 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02484 Gma-Chr17 42890061 42891526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02484 1 177 Peroxidase AT5G42180 76.966 1.87e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02484 K00430 - gmx:106796602 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02484 17 42890061 42891526 Gma17g02484 17 42890061 42891526 ECH
Gma17g02484 17 42890061 42891526 Gma14g02158 14 52730162 52732396 GST