Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02483 ATGCGCGATATGACATGTACGGGGTGGCTTTGTTCTCTACGAAGAACAACAGGTAGATCACGGAAGGAATGTGAGGAAGATAGATTGTGTAAGAAGCAAAGCGTGAATGAAGAATATTTGGAAGCGTTCAGAACAAAGTCTTACATCGAAATATGCAACAAAGCACAAGGGGGGATTGGAAAGACAAGCACCAAAATGCTAACTTCTTCTTCTTCTTCTTCAATTCCTTTGTGCATGCAACTCACGGAGTATTTACTAGAGCCACGGCAAGAGATGATAGCAAACATAACACAGAGATTGAAGCTTCATCATCTTCTTGTGGACTACTTCGAAGCCAGCTTAGAAGCGTGTCGTTGTTGTGACACAATCCTTGAAGCCATCCATTCAATGCGACTTTCTTATCGACGAATCACGAGAATTGTTAAGCTAAGCAAAACGGTGCTTGATGATGATGACACCAAGGGTGTAATCTATAGAGAGCTCGCTTCCTTTGCTCTGCAAAACAACCCTTTGTCCGTTGCTATTAGCAGCGTGAAGTTCCGTGACATTCATGACAGATACGTGGAACTCTTGAAAAGACTGAAATCAACGAGTAAGGAAATTCGAAGGAGGTTGACATTAAAGAGGGTTTGCAAGAAGGTTGCGGGGATTGCTCTTATTACTTCTCATAGTGTGGTTCTTGTTGCTTTGTTGGTGTTTGCTTTTCATAGCATTGTAGGGTTGGTGGCTGCGCCTAGTATCGTGGGTGGGTTGGTTGGTTTGTTCGTGAAGAAGGGTCGTCAAAGGTTTATGTCAATTAGCTCTAATAATAATAATAATAATTGTGAAGAGAGGCTGTGTGAGCAACTTGATTTGGCTGCAAAAGGGGTTTATGTTCTGATCAATGATTTGGACACAATGAGTAGGATGGTGAAGAGGTTGAACGATGAAGTGGAGCATAGGAAAGTGGTTGCTGAGGTTTGTGTGAGGAATGGGAAGAGTGAGATACTACTGAAGCAGGTTATGAGGGATTTTCATGAGCATGAGTCTAGCTTTCTGGAGCAGTTGGAAGAGCTGGAGGGGCATATCTACTTGTGCTTTCTCACCACAAACAGATCAAGGAGGCTTGTTGTGCAACAAATTACGGACAAAAAAGTAAAACATTGA 1146 0.425 MRDMTCTGWLCSLRRTTGRSRKECEEDRLCKKQSVNEEYLEAFRTKSYIEICNKAQGGIGKTSTKMLTSSSSSSIPLCMQLTEYLLEPRQEMIANITQRLKLHHLLVDYFEASLEACRCCDTILEAIHSMRLSYRRITRIVKLSKTVLDDDDTKGVIYRELASFALQNNPLSVAISSVKFRDIHDRYVELLKRLKSTSKEIRRRLTLKRVCKKVAGIALITSHSVVLVALLVFAFHSIVGLVAAPSIVGGLVGLFVKKGRQRFMSISSNNNNNNCEERLCEQLDLAAKGVYVLINDLDTMSRMVKRLNDEVEHRKVVAEVCVRNGKSEILLKQVMRDFHEHESSFLEQLEELEGHIYLCFLTTNRSRRLVVQQITDKKVKH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02483 381 Pfam Protein of unknown function (DUF677) 72 374 IPR007749 -
Gma17g02483 381 PANTHER UPF0496 PROTEIN 2-RELATED 19 378 - -
Gma17g02483 381 PANTHER UPF0496 PROTEIN 3-RELATED 19 378 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02483 Gma-Chr17 42887887 42889786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02483 - - gmx:100790505 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02483 17 42887887 42889786 Gma17g02483 17 42887887 42889786 ECH
Gma17g02483 17 42887887 42889786 Gma14g02157 14 52724619 52726120 GST