Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02482 ATGGCTGAGAGCAGAGCGAATCACACAGTGAGCGTATCTGGGTGGGCAGCTCATGATTCGTCGGGCAAGATTACCCCCTACAGCTTCAAAAGACGGCAGAACGGTGTGAACGATGTGACAATAAAGATCCTCTATTGTGGGATCTGCCACACGGATCTCCACTGTGCTAAAAATGAATGGGGCATCACTATGTACCCTGTGGTACCCGGACACGAGATCATTGGGGAGGTAACTAAGGTTGGGACCAATGTGAAGGGGTTCATGGAAGGAGACAGAGTGGGTGTGGGCTGTTTGGCGGCTTCATGCTTGGAATGTCACCACTGCAAGACCGATCAGGAAAACTACTGCCAAGACCTCCAATTTGTCTACAATGGAATCTTCTGGGATGGCACCATCACCTATGGTGGCTACTCCCAAATCTTTGTCGCGGATTACAGATATGTGGTACACATTCCGGCAAGCCTACCAATGGATGCGGCGGCTCCTCTGCTATGCGCAGGAATAACAGTGTTCAGTCCTTTGAAAGAGCACGATTTGGTAGCAACAGCGGGGAAGAGGATTGGGGTGGTTGGACTGGGAGGCCTTGGACACATTGCTGTTAAATTTGGCAAGGCTTTTGGCCACCATGTTACCGTCATCAGCACTTCTCCCTCCAAAGAACCAGAAGCTAAGCAGCGTTTGGGTGCTGATCACTTCATTCTCAGCTCTAATCCTAAACAATTACAGGCTGCAAGGAGAAGCATGGATTTCATATTGGACACTGTTTCGGCAGAGCACTCTCTCTTGCCTATTTTGGAATTGCTCAAAGTCAATGGAACCTTATTTCTCGTGGGTGCACCAGACAAGCCTTTACAATTGCCTGCTTTCCCATTGATATTTGGCAAGAGATCAGTGAAAGGTGGGATCATAGGGGGAATAAAAGAGACGCAGGAAATGTTGGAGGTTTGTGCAAAGTACAATATAACGAGTGACATTGAGTTAATCACACCAGACAAAATCAACGAGGCTATGGAGCGCCTTGCTAAGAATGATGTGCGCTACCGTTTCGTCATTGATATTGCTAATGCTGTCACTTCCAACAACAACTGA 1089 0.4793 MAESRANHTVSVSGWAAHDSSGKITPYSFKRRQNGVNDVTIKILYCGICHTDLHCAKNEWGITMYPVVPGHEIIGEVTKVGTNVKGFMEGDRVGVGCLAASCLECHHCKTDQENYCQDLQFVYNGIFWDGTITYGGYSQIFVADYRYVVHIPASLPMDAAAPLLCAGITVFSPLKEHDLVATAGKRIGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEPEAKQRLGADHFILSSNPKQLQAARRSMDFILDTVSAEHSLLPILELLKVNGTLFLVGAPDKPLQLPAFPLIFGKRSVKGGIIGGIKETQEMLEVCAKYNITSDIELITPDKINEAMERLAKNDVRYRFVIDIANAVTSNNN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02482 362 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Gma17g02482 362 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Gma17g02482 362 SUPERFAMILY GroES-like 18 177 IPR011032 -
Gma17g02482 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Gma17g02482 362 Gene3D - 15 353 - -
Gma17g02482 362 CDD CAD1 14 352 - -
Gma17g02482 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Gma17g02482 362 PANTHER ALDEHYDE REDUCTASE 3 357 - -
Gma17g02482 362 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 3 357 - -
Gma17g02482 362 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Gma17g02482 362 Gene3D - 166 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02482 Gma-Chr17 42880855 42883288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02482 14 357 Monolignol Biosynthesis Gene Families AT2G21730 59.710 6.66e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02482 K00083 - gmx:100779140 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02482 17 42880855 42883288 Gma17g02482 17 42880855 42883288 ECH
Gma17g02482 17 42880855 42883288 Gma14g02156 14 52716946 52719872 GST