Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02480 ATGGATAAGGTATTATGGGAGAGACTAGTAATGGTTGTGTTTGTTTTCTTTGCTATCCCATTTCCCAAAGTATTAGTTGTTAACGGAGCAATTCCGGCATTGTTTGCATTTGGTGACTCAATTCTTGATACGGGAAATAATAACAATATCCTAGCAATAACTAAGTGCAATTTTCCTCCGTACGGAAGGGATTTCCCAGGAGGAATACCTACGGGAAGATGTTGTAATGGAAAAATTCCTACAGATTTAATAGCATCGGCTTTGGGAATAAAAGAAACAGTGCCAGCATATCTGAGTGGTAACTTGAGTCCTCAAGACCTCGTCACCGGGGTATGCTTTGCTTCTGCTGGTTCCGGCATTGATGATGCCACTTCTAGGTTACAGCAGGGAGTTGTATCACTGCCAAGCCAACTGAGATTGTTCCAAGAATACATAGGAAAGCTTACAGCACTGGTTGGACAACAAAGAGCAGCTGACATCATATCCAAAAGCGTATTCCTCGTCTCAGCCGGCAACAATGACATTGCCATTACCTATTCTTTTCTATTAGCCCCAACATTGCAGCCTTTTCCTTTATATTCCACTCGTTTAGTTACCACCACTTCTAATTTTTTCAAGAGTCTTTATGAACTTGGAGCACGACGAGTGTGGGTATTAAGTACATTGCCACTTGGATGCTTGCCTGGAGGTAGAACTGTGGCAGGGGGACCATTAAGGATTTGTGCACCCTTTGCGAATCAATTTGCACAGACATTCAATGGCCAATTATCATCAGCAGTTGATTCTATGAGAGTCACCCTTCCCAATTATGACATTAGGTTCATCGATGTCTACACTCCTCTCTTTAATCTCATAAATAATCCTCAGCCAGAAGGGTTTGTAGATGTCTCGGAAGGGTGTTGTGGGACTGCGCCATTTGGAGTTTCAGGAATATGTACCCTTCTCAGTTTGTGCCCGAATCCTTCTTCATATGTTTTCTGGGATTCTGCTCATCCAACTGAGAGAGCTTATCGGTTTGTTGTGTCTTCTATATTACAACAACACACAAACAATGTTTCAAACTCTTTTGCTTTTGCTCCAGTTAATTCTTCCCTCTCAAATTAA 1104 0.4185 MDKVLWERLVMVVFVFFAIPFPKVLVVNGAIPALFAFGDSILDTGNNNNILAITKCNFPPYGRDFPGGIPTGRCCNGKIPTDLIASALGIKETVPAYLSGNLSPQDLVTGVCFASAGSGIDDATSRLQQGVVSLPSQLRLFQEYIGKLTALVGQQRAADIISKSVFLVSAGNNDIAITYSFLLAPTLQPFPLYSTRLVTTTSNFFKSLYELGARRVWVLSTLPLGCLPGGRTVAGGPLRICAPFANQFAQTFNGQLSSAVDSMRVTLPNYDIRFIDVYTPLFNLINNPQPEGFVDVSEGCCGTAPFGVSGICTLLSLCPNPSSYVFWDSAHPTERAYRFVVSSILQQHTNNVSNSFAFAPVNSSLSN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02480 367 PANTHER GDSL ESTERASE/LIPASE EXL3 1 352 - -
Gma17g02480 367 Pfam GDSL-like Lipase/Acylhydrolase 34 342 IPR001087 GO:0016788
Gma17g02480 367 Gene3D SGNH hydrolase 25 353 IPR036514 -
Gma17g02480 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 352 - -
Gma17g02480 367 SUPERFAMILY SGNH hydrolase 35 345 - -
Gma17g02480 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 34 45 IPR008265 GO:0006629|GO:0016298
Gma17g02480 367 CDD SGNH_plant_lipase_like 32 346 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02480 Gma-Chr17 42858284 42860470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02480 10 353 Pollen Coat Proteome AT1G75910 41.360 7.81e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02480 - - gmx:100789445 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02480 17 42858284 42860470 Gma14g02154 14 52694770 52697094 GST