Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02479 ATGGCTCTCATGCAGCTTACTAGCTCTCATGTTGCCTTATTGCTCCGTTTCATAGTAATATTTGCTCTATGTTACAGAACAATGGCTTTGGTGAAGTTGCCACCAAACGCTTCATCAGTTCCGGCAGTTTTAGCGTTTGGAGATTCGATCGTGGACTCAGGCAACAACAACAACATAAAAACACTGATTAAGTGCAACTTCCCACCTTATGGAAAAGATTTTCAGGGAGGAAACCCAACTGGTCGATTTTGCAATGGAAAAATTCCTTCTGACCTAATAGTTGAACAATTGGGTATTAAGGAGTATTTGCCTGCATATTTGGATCCGAATCTCAAATCTAGCGATCTTGTTACCGGCGTCGGCTTTGCCTCCGGTGCTTCAGGATACGATCCTTTGACACCCAAAATAACGTCAGTTATATCATTATCTACTCAACTAGACATGTTCAGGGAATACATAGGAAAGCTGAAAGGAATTGTTGGAGAGAGCAGAACAAACTACATCCTAGCCAACAGTCTTTATCTTGTGGTGGCAGGCAGTGACGACATTGCCAACACCTATTTTGTTGCTCACGCCAGAATATTACAGTATGACATTCCTTCTTACACCGACCTTATGGTCAACTCGGCCTCTAATTTTGTAAAGGAATTATATAATCTGGGAGCTCGTAGAGTTGCAGTACTGGGTGCACCGCCGATTGGATGCGTGCCATCACAGAGAACTCTGGCTGGAGGGCTAACAAGAAAGTGCTCAGAAAAGTACAATTACGCAGCCAGGTTGTTCAATTCCAAACTTTCAAAGGAACTTGATTCCCTCGGTCACAACTTGTCAGATACCAGGATAGTTTACATTGATGTTTACTCCCCTCTGCTCGATATCATTGATAACTACCAAAAATATGGCTATAAAGTTATGGACAGAGGTTGCTGTGGCACAGGCAAACTAGAGGTTGCAGTGTTATGCAACCCTTTGGATGACACTTGTTCCAATGCTTCGGAATATGTCTTTTGGGATAGTTATCATCCAACAGAAGGAGTGTACAGAAAGATCGTAAATCATGTTCTTGAAAAGTACATGGATCGATTGTTTTGA 1092 0.4222 MALMQLTSSHVALLLRFIVIFALCYRTMALVKLPPNASSVPAVLAFGDSIVDSGNNNNIKTLIKCNFPPYGKDFQGGNPTGRFCNGKIPSDLIVEQLGIKEYLPAYLDPNLKSSDLVTGVGFASGASGYDPLTPKITSVISLSTQLDMFREYIGKLKGIVGESRTNYILANSLYLVVAGSDDIANTYFVAHARILQYDIPSYTDLMVNSASNFVKELYNLGARRVAVLGAPPIGCVPSQRTLAGGLTRKCSEKYNYAARLFNSKLSKELDSLGHNLSDTRIVYIDVYSPLLDIIDNYQKYGYKVMDRGCCGTGKLEVAVLCNPLDDTCSNASEYVFWDSYHPTEGVYRKIVNHVLEKYMDRLF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02479 363 Gene3D SGNH hydrolase 32 359 IPR036514 -
Gma17g02479 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 362 - -
Gma17g02479 363 PANTHER GDSL ESTERASE/LIPASE EXL3 9 362 - -
Gma17g02479 363 CDD SGNH_plant_lipase_like 41 358 IPR035669 -
Gma17g02479 363 Pfam GDSL-like Lipase/Acylhydrolase 43 353 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02479 Gma-Chr17 42847944 42852721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02479 39 356 Pollen Coat Proteome AT1G75910 40.498 5.01e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02479 - - gmx:100777710 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02479 17 42847944 42852721 Gma17g02479 17 42847944 42852721 ECH
Gma17g02479 17 42847944 42852721 Gma14g02153 14 52686967 52691875 GST
Gma17g02479 17 42847944 42852721 Gma04g00214 04 1819136 1821089 PCT
Gma17g02479 17 42847944 42852721 Gma06g00197 06 1717334 1727970 PCT