Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02478 ATGGGTCTTTTTATGAAGCTCCCTTTTCCTCCTCATCTTGCAGCTTCCTCACTGCTCCATTTCATATTATTATTATTATTATTGATTTTTGATATTGTGTGTAAAACAAGGGCAGTTGTGAAAATTCCACCAAATGTTTCAGTTCCAGCAGTGTTGGTGTTTGGAGATTCGATCGTGGACACTGGCAACAACAACAACAACTTGGGAACAACGGCTCGGTGCAATTACCCACCATATGGTAAAGATTTTAAGGGAGGCAAACCAACTGGTCGATTTAGCAACGGAAAGGTTCCATCTGACTTTATAGCTGAAGAATTGGGCATTAAAGAGTATGTACCAGCATACTTGGATCCACATCTCCAACCTGGTGAATTGGCCACTGGTGTGTGCTTTGCATCCGGTGGTGCAGGATATGATCCTTTTACATCGCAATCAGCGTCGGCTATACCTTTATCGGGTCAACTAGACTTGTTCAAAGAATACATAGGCAAACTACGAGGAGTGGTTGGAGAAGACAGAGCAAAGTTCATCTTAGGCAACAGTCTTTATGTTGTGGTATTTGGCAGCAATGACATTTCCAATACTTACTTTTTGACCCGTGTTAGACAACTGCAATATGATTTTCCTGCATACGCTGATTTTTTGCTCAGCTCAGCTTCTAATTTCTTCAAGGAATTATATGGATTAGGGGCACGGAGGATCGCAGTGTTCAGTGCACCACCACTTGGGTGTTTGCCATCTCAGAGAACGCTGGCAGGAGGTTTAGAAAGAAAAATTGTAGTCAATATTAACAACGCAGTACAGATATATAACAGCAAATTGTCGAAGGAGCTGGATTCTCTCAATCACAACCTTCAAGATAGCAGGATAGTTTACATTGATGTTTACAACCCTCTCTTTGACATCATTGTAAACTACAATAAATATGGCTATAAAGTCGGAGACAAGGGGTGCTGTGGCACGGGCACAATAGAGGTTGTGTTATTATGCAACCGTTTCACTCCATTGTGCCCCAACGATTTGGAGTATGTGTTTTGGGACAGTTTTCATCCTACTGAAAGCGTTTATAAAAGGCTCATAGCTTCTCTTATTGGAAAATATTTGGATAAATTCTTGTGA 1119 0.4111 MGLFMKLPFPPHLAASSLLHFILLLLLLIFDIVCKTRAVVKIPPNVSVPAVLVFGDSIVDTGNNNNNLGTTARCNYPPYGKDFKGGKPTGRFSNGKVPSDFIAEELGIKEYVPAYLDPHLQPGELATGVCFASGGAGYDPFTSQSASAIPLSGQLDLFKEYIGKLRGVVGEDRAKFILGNSLYVVVFGSNDISNTYFLTRVRQLQYDFPAYADFLLSSASNFFKELYGLGARRIAVFSAPPLGCLPSQRTLAGGLERKIVVNINNAVQIYNSKLSKELDSLNHNLQDSRIVYIDVYNPLFDIIVNYNKYGYKVGDKGCCGTGTIEVVLLCNRFTPLCPNDLEYVFWDSFHPTESVYKRLIASLIGKYLDKFL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02478 372 CDD SGNH_plant_lipase_like 49 367 IPR035669 -
Gma17g02478 372 PANTHER GDSL ESTERASE/LIPASE EXL3 31 365 - -
Gma17g02478 372 SUPERFAMILY SGNH hydrolase 51 370 - -
Gma17g02478 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
Gma17g02478 372 Gene3D SGNH hydrolase 41 369 IPR036514 -
Gma17g02478 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 31 365 - -
Gma17g02478 372 Pfam GDSL-like Lipase/Acylhydrolase 51 359 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02478 Gma-Chr17 42824382 42829475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02478 22 364 Pollen Coat Proteome AT1G75910 40.751 3.25e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02478 - - gmx:100776651 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02478 17 42824382 42829475 Gma17g02478 17 42824382 42829475 ECH
Gma17g02478 17 42824382 42829475 Gma14g02152 14 52666338 52671319 GST
Gma17g02478 17 42824382 42829475 Gma04g00215 04 1824433 1828345 PCT
Gma17g02478 17 42824382 42829475 Gma06g00198 06 1737777 1743129 PCT