Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma17g02471 | ATGACTCTTGAAGATTTCTTTACGTTGACTGAAATGAAAGATGGCCTCATGGCCCCTTCTCGAGTGCAAGAGTTGGTCTCTGTAATGAAGAAGGAGCAAGATTGTGTTGCTAAGAATGCTGGTGATACAACAAGGCAGTGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTTGATTTTTTTATTAAATTAGATGGACTTGGGTTCATCAACAAATGGTTAAAGGATACCCTGAATTTGGGTGCTGATAATACTAATGATGGCTTCATTGAAGAGTCAATTACTGCAATGTTACGTGCAATTGAAAAACTGTATCTAGACAGCGAGAAATCAATTTCATCAGGAATTTCTGTGACTGTAAGTAACCTTCTTGGTCATCGTAGCTCTAAGGTGCAGGATAGAGCAAGAGTATTATTTGACCGCTGGAAAGGAGGTGGAGATGGAGATGCTGAACCAACTGATAATTCGGATCTTGGTAGAATCAACAATGTGAGTGATGAAATTGTCAGTGAGAAAGGCCAACCATCTTCTGTGAATGAAGCTGGCAATGAAGATGATCATGTATCTCAACCTGCTGGAGGTGAGAAGTCTCTACTGGGAGGCTCAGATAGTCAGCTACAAGAAAAAGTTTCTAGCATACAGATACAGAGTGCTGACAATGCACTCCAGTCCTCTGTAAGGTTGGATTGTGAAGATGCCAAAGAGAGATCAAACCATGTTGATAGTGTTTTGGCTTCTGTTCAAGAAGTTGCTAACATAAATGAAGGCGGCACCACATCGGCTGGGACCTGTAACTTACCTGTTAATAAACAAGACAGTTTCAAAGGTCAACAAGATGATTTAGAGTTAAATGACTTGTCCAAAAAGGAGATGCAAGATGAAAATGTTAATGATCCTCCAGAAGAATTAAGAGCATCAGATATCTCTTTGGCATCTGCAAAGCCAGAACCTGAACCTGTCTCCATTGGTGATAGTGAAGCAAAAGCACTGGAATCTGTGAAAGAAGAACCTGCTTTAGAACATAACGCTGAAAGCAATGAAAATATCATTTGTCCTAAAATAAATGTTTCTGGTAGCATGAGAACACCTGCGTCAGATGGGATAAGTGTGGGAGATGATGTCAGAGCTATAAATTCCAGCAATCCACAACTTCCCAAAGCATCAGAAAATGATGACTGTTGTTCTCAAGCATTGCAGGACTTATCAGTCACTAGCAGTCACTTGGAAAAGCCTGAGATGTCTTTCCTCAAAACACAATATGTAGGAGCAGTTAAGGAAAGCAAGGGCCAAGAGTCTGATCAAGATGATGATACCTCAGATGGTTCTGACTCTTCTAACCAGGGTAAAGGTCCCACAAGCCCTAACATTATTGACAAGAATTCTGACATGGAACTTGAGTATGGTATTGTTGATGCTTTAGAAGTTGCTCGACTAGTTGCCCAGGAAGTTGAGAGGGAATGTGTCAGCCCTATAAAGCAAGGGCATGGCCAAGTTTCTTATAAAGTCAACAGTACCACAAATGGTTCTGATTCTTTTAAATGGGGAAATGGCCCCAAAAGCCCTAATGTTATTGACAAGAGTTCTGATATTGAACTTGAGTATGGTATTGTTGATGCTTTAGAAGTTGCCCGACAAGTTGCTCAGGAGGTTGAGAGAGAAGTTTGCAGCTCTTCTTCAGAGAAAATCTCAGAAGGTGGAATCAGGCAGGCAGCCAGCCCTGATTTTGTAGGGAGAAAGGATGAAGTCACTCGTGTCCTACATGAGGAGGTATCATCCAGGCAAAGCAACTCTGATGAGGTGTGTTCTGAAGAGGCAGGACATATGAGTGTTTCCGATAATATTGAGGCTGGGCAAGATGACTTGGAGTCCTCGCAGGTGACTGAAGCAGCTCGAGACCCAGGAGGTAACTCAGAGAAAAGTCTCTGTACCTTTGATCTCAATGAAGAAGTTGGTTCTGATGATATGGATGTTTCTGTGAATGCCATGTCTACTATGCCAATACCAGTTGTTTCTGCTTCAAAACCTGCACTGACTTCTTGGTTGCCAATGGCCCCTTTGCAGTTTGAGGGGACCCTTGGATGGAAAGGATCAGCTGCCACCAGCGCCTTTCGTCCTGCATCTCCTCGTAAAAATTCTGATAATGAGAAGAATGTTTCTGTTGGTGGAAACTCCTCAGAGATTTCCAAGCAGAGGCAGGATTGCCTTGATTTTGATCTGAATGTGGCTGAGGGTGAAGAAGGACTGCTAAAACAAATTGGTGAATCTTCAGGCCTTCCTTCTGGCCAATCATCAGTGGAACTTAGTCCTAAAAGATCAAGCAGGTTCAAATTGGATTTAAATAGTATCGGTGATGATGGTGATGCCCAACCTTCAGATCAGAGGATGGAGGGGCCACTTTTTCCCAGAAGAAATGGTTATTGGAGCCCATCACCTGCTTCATCGTCATCATCAATGCAACCTTTAGTACGAAACATTGATCTGAATGACAGACCATTCTTTCAAACCGATTTAGTGGACCAAGGGCTTAGTAAGTCATCTTCGATTATTGAAGCATATAAACAATCCAAGTCGGATGCTCCTGTGATCTCTATTTTGGGTGCCAAGGTGGAAGTTGGTACAAGAGAATATATTCCTCAAACTTTGTCTTTTCCAAATGGCAAGGCTATTGAGCCTGCAATGGATCTTCCATTGTCAGGAGCAGGTAGCGTTTTAGGAATGGGCCCCACACTATCCTACAATCATTCAACTGCTTTTGGGTACAACGGACTGACATCAGTGCCTGCTTTATCTTTTTCACCAGCCATGTATGGATCACCTGGTGGCCCAATTCCATACATGGTAGACTCAAGAGGAAGTCCAGTCGTGCCTCAGGTTGGGGGATCTTCCTCAACTGCCCTGTCATCTTATTCTCAACCTCCATTTATCGTGAGCATTACCGGTACACAGCTTGGTTTAAATGGGGTTGGATCTTCACGCCCCAACTTTGATCTGAACTCTGGCTTCACGATTGATGGAGGGAACAGAGACATGTTGACTGCAAGGCAATTTTTCTTTCCTGCTCAAGGCAGAGCTATGGAGGATCATGTGAGGACCCTTCCACAATCCTCAAGTTCTGGAGTTAGTGTGAAAAGAAAGGAACCAGATGGTGGCTGGGATACCTATCCTCTTAGCTACAAACATCAGCAACCTCCATGGAAGTAG | 3216 | 0.4322 | MTLEDFFTLTEMKDGLMAPSRVQELVSVMKKEQDCVAKNAGDTTRQWAAVASTIAATENKDCLDFFIKLDGLGFINKWLKDTLNLGADNTNDGFIEESITAMLRAIEKLYLDSEKSISSGISVTVSNLLGHRSSKVQDRARVLFDRWKGGGDGDAEPTDNSDLGRINNVSDEIVSEKGQPSSVNEAGNEDDHVSQPAGGEKSLLGGSDSQLQEKVSSIQIQSADNALQSSVRLDCEDAKERSNHVDSVLASVQEVANINEGGTTSAGTCNLPVNKQDSFKGQQDDLELNDLSKKEMQDENVNDPPEELRASDISLASAKPEPEPVSIGDSEAKALESVKEEPALEHNAESNENIICPKINVSGSMRTPASDGISVGDDVRAINSSNPQLPKASENDDCCSQALQDLSVTSSHLEKPEMSFLKTQYVGAVKESKGQESDQDDDTSDGSDSSNQGKGPTSPNIIDKNSDMELEYGIVDALEVARLVAQEVERECVSPIKQGHGQVSYKVNSTTNGSDSFKWGNGPKSPNVIDKSSDIELEYGIVDALEVARQVAQEVEREVCSSSSEKISEGGIRQAASPDFVGRKDEVTRVLHEEVSSRQSNSDEVCSEEAGHMSVSDNIEAGQDDLESSQVTEAARDPGGNSEKSLCTFDLNEEVGSDDMDVSVNAMSTMPIPVVSASKPALTSWLPMAPLQFEGTLGWKGSAATSAFRPASPRKNSDNEKNVSVGGNSSEISKQRQDCLDFDLNVAEGEEGLLKQIGESSGLPSGQSSVELSPKRSSRFKLDLNSIGDDGDAQPSDQRMEGPLFPRRNGYWSPSPASSSSSMQPLVRNIDLNDRPFFQTDLVDQGLSKSSSIIEAYKQSKSDAPVISILGAKVEVGTREYIPQTLSFPNGKAIEPAMDLPLSGAGSVLGMGPTLSYNHSTAFGYNGLTSVPALSFSPAMYGSPGGPIPYMVDSRGSPVVPQVGGSSSTALSSYSQPPFIVSITGTQLGLNGVGSSRPNFDLNSGFTIDGGNRDMLTARQFFFPAQGRAMEDHVRTLPQSSSSGVSVKRKEPDGGWDTYPLSYKHQQPPWK | 1071 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 1036 | 1071 | - | - | |
Gma17g02471 | 1071 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED | 1 | 493 | - | - | |
Gma17g02471 | 1071 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED | 505 | 1071 | - | - | |
Gma17g02471 | 1071 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 17 | 149 | IPR035441 | - | |
Gma17g02471 | 1071 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN | 505 | 1071 | - | - | |
Gma17g02471 | 1071 | PANTHER | TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN | 1 | 493 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 782 | 802 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 619 | 644 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 379 | 396 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 704 | 734 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 260 | 279 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 147 | 213 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 161 | 189 | - | - | |
Gma17g02471 | 1071 | ProSiteProfiles | TFIIS N-terminal domain profile. | 73 | 154 | IPR017923 | - | |
Gma17g02471 | 1071 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 61 | 160 | IPR035441 | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 709 | 734 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 446 | 464 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 280 | 306 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 366 | 396 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 430 | 465 | - | - | |
Gma17g02471 | 1071 | MobiDBLite | consensus disorder prediction | 260 | 330 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma17g02471 | Gma-Chr17 | 42746125 | 42749340 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Gma17g02471 | Med26 | 0.0003 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma17g02471 | - | - | gmx:102667261 | 2068.12 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma17g02471 | 17 | 42746125 | 42749340 | Gma17g02471 | 17 | 42746125 | 42749340 | ECH |