Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02435 ATGGCTCGTCACTCCTTGCTCTTAGCCCTCCTCCTCTTCGCCGCCGTGGCCACCGCCGCGATGGCGGTGGCCGCGTCCGACGCCGACGACATCCTGATCCGTCAGGTGGTGCCAGATGTTGGCGAAGCCGAAGAGGAGGACAACCTGCTGAACGCCGAGCACCACTTCGCGAGCTTCAAGGCCAAGTTCGCCAAGACCTACGCCACCAAGGAGGAGCACGATCATCGCTTCGGCGTCTTCAAGTCCAACCTCCGCAGAGCCAGGCTGCACGCCAAGCTCGACCCCTCCGCCGTCCACGGCGTCACCAAATTCTCCGATCTAACTCCGGCCGAGTTCCGCCGCCAGTTCCTCGGCCTCAAGCCGCTCCGCTTCCCGGCGCACGCCCAGAAGGCGCCCATCCTCCCCACCAAGGATCTCCCCAAGGATTTCGATTGGCGAGACAAAGGAGCCGTCACTAACGTCAAGGACCAAGGGGCGTGTGGTTCGTGTTGGTCTTTCAGTACGACGGGAGCGTTGGAAGGAGCTCATTATCTGGCCACTGGTGAGCTCGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACGTGTGTGATCCAGAAGAATATGGAGCGTGTGACTCAGGCTGTAATGGTGGGTTGATGAACAACGCATTTGAGTACATACTTCAGTCTGGGGGAGTACAGAAAGAAAAGGACTATCCATACACCGGGAGAGATGGCACCTGCAAATTTGACAAAACCAAAGTTGCGGCTACTGTATCTAATTACAGTGTGGTTTCCCTTGATGAAGAACAAATTGCTGCAAACCTAGTAAAGAATGGCCCTCTTGCAGTTGCTATCAATGCAGTTTTTATGCAGACATATGTTGGTGGCGTCTCATGCCCATACATCTGTGGGAAGCATTTGGATCATGGGGTTCTTCTAGTTGGTTATGGTGAAGGTGCATATGCTCCCATTCGTTTTAAGAACAAACCTTACTGGATCATTAAGAATTCATGGGGCGAGAGCTGGGGAGAGAATGGATATTACAAGATCTGCAGAGGTCGAAATGTGTGTGGAGTAGATTCCATGGTCTCAACTGTAGCTGCTATATATCCATCCAGCCATTAA 1113 0.5355 MARHSLLLALLLFAAVATAAMAVAASDADDILIRQVVPDVGEAEEEDNLLNAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPAEFRRQFLGLKPLRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDGTCKFDKTKVAATVSNYSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAIYPSSH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02435 370 SMART Inhibitor_I29_2 56 112 IPR013201 -
Gma17g02435 370 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Gma17g02435 370 SUPERFAMILY Cysteine proteinases 53 362 IPR038765 -
Gma17g02435 370 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 364 - -
Gma17g02435 370 Pfam Papain family cysteine protease 139 361 IPR000668 GO:0006508|GO:0008234
Gma17g02435 370 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 303 313 IPR025660 -
Gma17g02435 370 CDD Peptidase_C1A 140 362 IPR039417 -
Gma17g02435 370 SMART pept_c1 139 363 IPR000668 GO:0006508|GO:0008234
Gma17g02435 370 Gene3D Cysteine proteinases 28 363 - -
Gma17g02435 370 PANTHER CYSTEINE PROTEASE RD19C-RELATED 30 364 - -
Gma17g02435 370 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 327 346 IPR025661 -
Gma17g02435 370 Pfam Cathepsin propeptide inhibitor domain (I29) 56 112 IPR013201 -
Gma17g02435 370 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Gma17g02435 370 PRINTS Papain cysteine protease (C1) family signature 305 315 IPR000668 GO:0006508|GO:0008234
Gma17g02435 370 PRINTS Papain cysteine protease (C1) family signature 327 333 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02435 Gma-Chr17 42312281 42315523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02435 K01373 - gmx:547893 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02435 17 42312281 42315523 Gma17g02435 17 42312281 42315523 ECH
Gma17g02435 17 42312281 42315523 Gma14g02107 14 52178236 52181120 GST
Gma17g02435 17 42312281 42315523 Gma04g00261 04 2282295 2283780 PCT
Gma17g02435 17 42312281 42315523 Gma06g00245 06 2191828 2193876 PCT
Gma04g00261 04 2282295 2283780 Gma17g02435 17 42312281 42315523 PCT
Gma06g00245 06 2191828 2193876 Gma17g02435 17 42312281 42315523 PCT