Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02432 ATGGCTGATTTAGGCTCAGCCCCTTCCAAGAGAATGTGGTGTTCCGTTCCCGAAAGAATGCAGCTGCACTTGGCCATGCTTGCCTTGCAGTTTGGCTATGCTGGATTCCATGTCATCTCAAGAGCTGCACTTAACATGGGCGTTAGCAAGCTTGTTTTCCCTGTCTATCGGAACATCATTGCTTTGCTTTTGCTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCCATGACTTTAAACTTCGTCGGCCAGTTCTTTCTTCTGGCACTCGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGACAACACATCCCCTACCTTCGCATCAGCAATACAGAACTCTGTGCCAGCCATTACATTCCTCATGGCAGTCATATTAAGGCAACAAGTAAGATTGAACCGAAAAGATGGGTTGGCTAAGGTGGCGGGAACAGTGCTATGCGTGGCTGGGGCGACCGTGATCACACTATACAAAGGTCCAACAATATACAGCCCAACAACTCGTGTGAACAACAGCATGATCATGAACAGAAGCAACACAACAGTTATAACACCAATGTTTGATTTTGGGTCACTGTCACTGGGAGACGCAAAGGGGAAGAACTGGACCCTAGGGTGCTTATACCTGATCGGACACTGCTTGTCGTGGTCTGGTTGGCTTGTGTTGCAAGCACCGGTTCTCAAGAAGTACCCTGCTCGCCTCTCTGTCACTTCCTACACCTGCTTCTTTGGAATCTTGCAGTTTCTCGTCATTGCTTTGCTCCTTGAAAGAGACGCTCAGGCTTGGCTTTTCCACTCTGCTGGAGAAGTTTTCACTATTTTATACGCGGGAGTGGTGGCATCCGGAATTGCCTTCGCTGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCCGTCTATCAACCTGTTCAGACTTTTGTTGTGGCCATCATGGCTTCCATTGCTTTAGGAGAAGAGTTCTACTTGGGTGGGATCATTGGGGCAGTGTTGATTGTAGCGGGACTGTACTTTGTCTTATGGGGTAAAAGTGAAGAGAGGAAGTTTGCAATGGAACAGCTTGCGATGGCATCCACTGAGCATAATAGCATCGCAAGCCACGTCAAAGCATCACTTGCTCAGCCACTCCTTTCTTCATCAACAGAGAATGTTTGA 1182 0.4805 MADLGSAPSKRMWCSVPERMQLHLAMLALQFGYAGFHVISRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTLNFVGQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRQQVRLNRKDGLAKVAGTVLCVAGATVITLYKGPTIYSPTTRVNNSMIMNRSNTTVITPMFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGILQFLVIALLLERDAQAWLFHSAGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAMEQLAMASTEHNSIASHVKASLAQPLLSSSTENV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02432 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 165 - -
Gma17g02432 393 PANTHER WAT1-RELATED PROTEIN 14 373 - -
Gma17g02432 393 PANTHER WAT1-RELATED PROTEIN 14 373 IPR030184 GO:0016021|GO:0022857
Gma17g02432 393 Coils Coil 386 393 - -
Gma17g02432 393 Pfam EamA-like transporter family 211 349 IPR000620 GO:0016020|GO:0016021
Gma17g02432 393 Pfam EamA-like transporter family 25 162 IPR000620 GO:0016020|GO:0016021
Gma17g02432 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02432 Gma-Chr17 42295888 42299970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02432 1 393 Nodulin-like Gene Family AT1G75500 72.319 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02432 - - gmx:100806765 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02432 17 42295888 42299970 Gma17g02432 17 42295888 42299970 ECH
Gma17g02432 17 42295888 42299970 Gma14g02106 14 52151123 52155782 GST
Gma17g02432 17 42295888 42299970 Gma04g00263 04 2315993 2319472 PCT
Gma17g02432 17 42295888 42299970 Gma06g00248 06 2220896 2224145 PCT
Gma04g00263 04 2315993 2319472 Gma17g02432 17 42295888 42299970 PCT
Gma06g00248 06 2220896 2224145 Gma17g02432 17 42295888 42299970 PCT