Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02406 ATGGGTTCTCTTATGGCAGGATGGTATTCTACCCACATGGATCCTCAATCAGCCACACTTAAAAGGAACCGCTCACTCACTAAGGATGAAATTGATGCTTACTGGAAATCAAAGAAGAAGATAGAGGAAGAACACCTTAGAGCTATTTCCAATGTGTCAGAGACTATTCAGGCTAGTAAAAACACAGAGCCTGAAAAGAAGTTGCAGAAGTCAATGACCATGCCAGTTACCCGTGCACGGGACTACTTAAATATGGTGGACATTGACACAAGTTTGGAGCAACTTATTAAGCGAAATGGCTGGTGGACCAAGAGTAGCTGGGCGTTTCTGAATGAGCCTCCAGTGACTGAAGCTGCGTCCAATAAGTGTGAAACTCAACAGGAGGCCATCATGCATCTTCTCAGAGAGATTTTTTCCATTCCAGACGAATTTGGAGTTGCACCAAGTTCGATAATGCTACTTACGTACACAATCATATGTTATGAGCTGGTTTTACAATAA 501 0.4271 MGSLMAGWYSTHMDPQSATLKRNRSLTKDEIDAYWKSKKKIEEEHLRAISNVSETIQASKNTEPEKKLQKSMTMPVTRARDYLNMVDIDTSLEQLIKRNGWWTKSSWAFLNEPPVTEAASNKCETQQEAIMHLLREIFSIPDEFGVAPSSIMLLTYTIICYELVLQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02406 166 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 127 - -
Gma17g02406 166 PANTHER - 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02406 Gma-Chr17 42058521 42062257 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02406 - - gmx:100798264 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02406 17 42058521 42062257 Gma17g02406 17 42058521 42062257 ECH
Gma17g02406 17 42058521 42062257 Gma14g00630 14 6147491 6149753 GST
Gma17g02406 17 42058521 42062257 Gma04g00293 04 2535884 2538989 PCT
Gma04g00293 04 2535884 2538989 Gma17g02406 17 42058521 42062257 PCT