Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02369 ATGAAGTCCAATCCAAAATCAAAAACACCACCCCACTTATTATACTACCTTCTAATAATCCTCTCCTTACTGTTCTTCTTCCCGTGTGTATCCTCTACCCAACAATTCAAAGAAGCCCCTCAATTCTACAACTCCCCAAACTGCCCCTCAATTGAACACAACATATGCTCCGAGGAAGCCGTCCACGTGGCAATGACACTCGACACGACATACATCCGAGGATCCATGGCGGCGATCCTTTCCGTCCTCCAACACTCTTCGTGCCCCCAAAACACCTTCTTCCACTTCGTGTGCTCCTCCAATGACAACACCAACGCGTCCCTCCTACGCGCCACAATCTCCAACACATTCCCCTACCTGAATTTCCAACTCTACCCCTTCCACGACGCCGTCGTTTCGGGCCTCATCTCCACCTCCATCCGCGCCGCACTCGATTGCCCCCTCAACTACGCGCGCAGCTACTTGGCCAACCTCATCCCGCCCTGCGTGAAGCGCGTGGTGTACCTCGACTCCGACCTCGTACTCGTCGACGACATCGCCAAGCTCGCGACAACCTCGTTGGGAGAAAACAACAACGTTTTGGCGGCGCCGGAATATTGCAACGCGAACTTCACCTCGTACTTCACTCCCACGTTCTGGTCGAACCCTTCTCTGTCGCTAACGTTCGCGGACAGAAAACAGAAAGCGTGTTACTTTAACACGGGGGTGATGGTGATTGATTTGGAACGGTGGCGCGAAGGGGATTACACGAGAAAAATCGAGGAGTGGATGGAGCTTCAGAAGAGGATGAGAATCTACGAACTTGGTTCGTTGCCGCCGTTTTTGCTTGTGTTTGCGGGGAACATTGTTTCGGTGGATCATAGGTGGAACCAACATGGTTTAGGAGGGGACAATTTTCGAGGTCTGTGTCGGGATCTGCACCCAGGTCCGGTGAGTTTGTTGCATTGGAGTGGGAAGGGGAAACCATGGGTGAGATTGGACGCTAACAGGCCTTGTCCTTTGGATGCGCTTTGGGCACCTTATGATCTATTACGTACCCCCTTTTCTTTCGACTCTTGA 1059 0.5231 MKSNPKSKTPPHLLYYLLIILSLLFFFPCVSSTQQFKEAPQFYNSPNCPSIEHNICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNTFFHFVCSSNDNTNASLLRATISNTFPYLNFQLYPFHDAVVSGLISTSIRAALDCPLNYARSYLANLIPPCVKRVVYLDSDLVLVDDIAKLATTSLGENNNVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRKQKACYFNTGVMVIDLERWREGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIVSVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLRTPFSFDS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02369 352 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 332 IPR029044 -
Gma17g02369 352 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 352 - -
Gma17g02369 352 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 343 IPR029044 -
Gma17g02369 352 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 8 352 - -
Gma17g02369 352 Pfam Glycosyl transferase family 8 62 325 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02369 Gma-Chr17 41751492 41753187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02369 34 352 Glycosyltransferase AT1G19300 76.364 1.20e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02369 K20893 - gmx:100806754 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02369 17 41751492 41753187 Gma17g02369 17 41751492 41753187 ECH
Gma17g02369 17 41751492 41753187 Gma14g00669 14 6563849 6564940 GST
Gma17g02369 17 41751492 41753187 Gma04g00327 04 2800393 2801690 PCT
Gma17g02369 17 41751492 41753187 Gma06g00310 06 2729604 2731360 PCT
Gma04g00327 04 2800393 2801690 Gma17g02369 17 41751492 41753187 PCT
Gma06g00310 06 2729604 2731360 Gma17g02369 17 41751492 41753187 PCT