Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02345 ATGTTGTCAATAAAATTGCTTTTGTGGTTCCTGTTTTTGTCATGGTGCCACTTTGCCATCCCATGCTGCGAGGCCAACCAACAAGGGGAATATCTCTATAAGTTTATTCGATCAAGGAGGGCTCAAAAACGCTCTTATGGAGAAGCTTCTTCAATGGCCACAAATCTTGGTGGTGATGGAAAATTTTCGAAGGTTTATGTTGTTAAGGAACAATCTGGGTTGATGGAAGGTGACAAAGTGAAGGCTTTGCCGGGACAACCAGCACAAGGGGTGGATTTTGATCAATATGCTGGCTATGTCACGGTGGATGCCAAGGCAGGGAGAGCACTGTTCTATTACTTTGTGGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTAAATGGAGGGCCTGGCTGCTCTTCCTTTGGGTATGGAGCCATGCAAGAACTCGGACCTTTTAGAGTCAACAGTGATGGAAGAACACTTTACACAAATCAATATGCATGGAACAATGTGGCAAACGTGATTTTCCTAGAGTCTCCAGCAGGAGTTGGTTTTTCATATTCAAACACTTCTTCTGACTACACTAAAACTGGTGACAAGAGCACAGCTATGGACTCTTACACTTTTCTTCTAAACTGGCTCGAGAGATTTCCACAGTACAAAACTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTTGCTGACACTATTCTCACTTATAATAAGCTTACAAATCACACAGTGATCAACCTGAAAGGGATTGCGGTTGGGAATGGCTGGATAGATGATAATATGTGTGGAAAGGGAATGTATGAATATTTCTGGACACATGCTCTGAACTCTGATGAAACCCATGAGGGAATTCAAAGGCATTGTGACTTTGAGAACGGTAACTTAACAAGTGAGTGCAGCAAATATCAAATTAGAGGGGATATTGAGATTGGAACCATTGACATATATGGCATATATGCTCCCCCTTGTGATTCAGCTGCAACAAAAGCTGGTGCCAGTCCTGCCACTAACTCTGATAGCAATTACGACCCTTGTTCTGACGATTATACCAATTCCTACTTAAATCTCGCGGAAGTACAAGAGGCTCTACATGCTAAAGCTTCAGTATGGTATCCTTGCAGAGGGGTGGGATGGACAGATAGCCCAGCAACAATTCTACCAACTATAAATCGGTTAATATCAAGTGGCATAAACACCTGGATATATAGTGGCGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAATAAATTCCATGAAACTTCCAGTGGAGACAACATGGCGTCCATGGTATTCTAGCAATGAGGTTGGAGGATACTTGGTTGGGTACAAAGGGCTCACACTAATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCGCAGAGAGCCCTAACCATGATCTCATTTTTCCTACGAGGAGAACTTCCTCCTGAGTTCACCTCTTAG 1491 0.4359 MLSIKLLLWFLFLSWCHFAIPCCEANQQGEYLYKFIRSRRAQKRSYGEASSMATNLGGDGKFSKVYVVKEQSGLMEGDKVKALPGQPAQGVDFDQYAGYVTVDAKAGRALFYYFVESPHNASNKPLVLWLNGGPGCSSFGYGAMQELGPFRVNSDGRTLYTNQYAWNNVANVIFLESPAGVGFSYSNTSSDYTKTGDKSTAMDSYTFLLNWLERFPQYKTRDLFITGESYAGHYVPQLADTILTYNKLTNHTVINLKGIAVGNGWIDDNMCGKGMYEYFWTHALNSDETHEGIQRHCDFENGNLTSECSKYQIRGDIEIGTIDIYGIYAPPCDSAATKAGASPATNSDSNYDPCSDDYTNSYLNLAEVQEALHAKASVWYPCRGVGWTDSPATILPTINRLISSGINTWIYSGDTDGRVPITSSRYSINSMKLPVETTWRPWYSSNEVGGYLVGYKGLTLITVRGAGHMVPSYQPQRALTMISFFLRGELPPEFTS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02345 496 Gene3D - 394 488 - -
Gma17g02345 496 PANTHER CARBOXYPEPTIDASE 22 493 - -
Gma17g02345 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 493 IPR001563 GO:0004185|GO:0006508
Gma17g02345 496 Pfam Serine carboxypeptidase 88 487 IPR001563 GO:0004185|GO:0006508
Gma17g02345 496 ProSitePatterns Serine carboxypeptidases, serine active site. 225 232 IPR018202 GO:0004185
Gma17g02345 496 Gene3D alpha/beta hydrolase 75 334 IPR029058 -
Gma17g02345 496 SUPERFAMILY alpha/beta-Hydrolases 82 489 IPR029058 -
Gma17g02345 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Gma17g02345 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Gma17g02345 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 236 IPR001563 GO:0004185|GO:0006508
Gma17g02345 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Gma17g02345 496 Gene3D - 354 385 - -
Gma17g02345 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02345 Gma-Chr17 41448634 41453891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02345 362 489 Calmodulin-binding Proteins AT2G22960 30.075 7.62e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02345 K16297 - gmx:100820473 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02345 17 41448634 41453891 Gma17g02345 17 41448634 41453891 ECH
Gma17g02345 17 41448634 41453891 Gma14g00694 14 6971087 6976982 GST