Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02294 ATGGCTGTGAGCGATGGCAATACGATTGCGGTGAAGGAAGCAGCTTCTGCGGGGATTCACAACGTAGAGAAACTCGTGAACATGATTTTGAATCAACACAACGAGGGTGGTTCTGAATTGGAGGCAGTTGCTGACGTGGCGGTGAACCGCTTCAGAGAGGTTATTTCGCTGCTTGAGAAACCAATTACCAGAACCACCGGTCACGCTCGTTTCCGAAGGGCCCCTACAACAGTGCCACCTGTCCCTGTTGTTCAGTTGCAGCAAATGGTGGATGATGATTCCAAACACAAACTGCAGAACAAAACAGAACAAAAACAAAAACAAAGTACCTCTGCTTTTAAGGTTTATTGTCCCCCTCCTTCTCCTCCTCTGCCTCAAAATCAAAATCACCACCACCAACAACAACCTTTCATTCTTCCTCTGCATAAGAATGAAGCAAATGGTTCTACTACCAACTCCCATTTTTCTACGTTATCCGGGGACACTGAGAGTTTGCAACGGTCATGTCTCTCTTCGGGGTTTCAAATTTCTCACGTGTCAATGCAAGGGGGTTCCTTTAAGCGTAAACCTCCACTTTCTACAAATTCTGTGAAGAGGAAGTGCAATTCAACGGGTTTTCCTGATACCAAGTGTGGATCGTCCTCTGTGCAGTGCCATTGCTCCAAGAAAAGAGGTTATTACAAGTGCACCAGCGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGTGCTGTGGACGATTCCAACATGCTCGTTGTCACCTACGAAGGAGAACATAATCACTCGCAAATCGCTTCTGAGGTGGCAAATGTTATCCTTGAATCATCTTAG 831 0.4693 MAVSDGNTIAVKEAASAGIHNVEKLVNMILNQHNEGGSELEAVADVAVNRFREVISLLEKPITRTTGHARFRRAPTTVPPVPVVQLQQMVDDDSKHKLQNKTEQKQKQSTSAFKVYCPPPSPPLPQNQNHHHQQQPFILPLHKNEANGSTTNSHFSTLSGDTESLQRSCLSSGFQISHVSMQGGSFKRKPPLSTNSVKRKCNSTGFPDTKCGSSSVQCHCSKKRGYYKCTSVRGCPARKHVERAVDDSNMLVVTYEGEHNHSQIASEVANVILESS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02294 276 MobiDBLite consensus disorder prediction 93 134 - -
Gma17g02294 276 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 8 224 - -
Gma17g02294 276 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 224 276 - -
Gma17g02294 276 SMART WRKY_cls 219 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02294 276 Pfam WRKY DNA -binding domain 221 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02294 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 224 IPR044810 GO:0003700
Gma17g02294 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 224 276 IPR044810 GO:0003700
Gma17g02294 276 Gene3D WRKY domain 193 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g02294 276 ProSiteProfiles WRKY domain profile. 224 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02294 276 SUPERFAMILY WRKY DNA-binding domain 220 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02294 Gma-Chr17 40896266 40897975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02294 10 224 WRKY Transcription Factor Family AT4G24240 37.600 2.74e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g02294 WRKY 2.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02294 - - gmx:100786245 489.189