Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02265 ATGAGTTGCAACGGTTGCCGTGTGCTCCGGAAGGGGTGCAGTGACACATGTCCTCTGAGGTCGTGCCTGCAGTGGATCGAGTCTCCGGAGTCACAACGACACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGTAGCGACCTAATTTCCTTCATTTCTTCCGTCCCCGAAACCAAAAGACCCGGGTGCGGGCGAATGGTAAATCCGGTGAACGGTGCCGTGGGACTTCTGTCGAGCGGAAAATGGCACGTGTGTCAGGCCGCTGTGGAGACGGTGCTCGACGGAGGCGTTCTTCGTCCGTCGTCTGAGACATTCACCGGAGATTCCGATGACACGCGCTATCATTTACGGACATTAACACTCATGCATGACGCTGCTTTGAAGTTAGCTGTTTTGGATTTGACAGGTTTTGAACCAAATAAAGAGCCTTTAAGAGGGAAGATGGAGGGAGAAGCCAACAGGGTGGCATGGGTTTCAAAGAGGAACTTGCAAGTTGCGACTTTGACGGAGGAAGCAGCTAGGGAACAAAAAATTACATTTTCTAGCAGTTATAAGCGCCAGAAAATGGTTTAA 573 0.5131 MSCNGCRVLRKGCSDTCPLRSCLQWIESPESQRHATLFLAKFFGRSDLISFISSVPETKRPGCGRMVNPVNGAVGLLSSGKWHVCQAAVETVLDGGVLRPSSETFTGDSDDTRYHLRTLTLMHDAALKLAVLDLTGFEPNKEPLRGKMEGEANRVAWVSKRNLQVATLTEEAAREQKITFSSSYKRQKMV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02265 190 Pfam Lateral organ boundaries (LOB) domain 2 91 IPR004883 -
Gma17g02265 190 ProSiteProfiles LOB domain profile. 1 98 IPR004883 -
Gma17g02265 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 110 - -
Gma17g02265 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02265 Gma-Chr17 40538309 40543695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02265 1 109 AS2 family AT4G37540 68.644 1.24e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma17g02265 LOB 2.2e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02265 17 40538309 40543695 Gma17g02265 17 40538309 40543695 ECH