Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02197 ATGAAAAGAAGAAGTTTGAGCATGAATTACCACCTTGTATCTTCACGAATCACCTCATCATCACCCTCTTATAATTTTCTGCTTGGTGGTGGTGTGGATGAAAATTCAGATAAAGCAATATCTGATGGGTACATAGCCAATGTCGGTGGTGGTGGACTCACTTCAACAACTCGTCATCAAGAAAGGAAAAAAGGTGTGCCATGGAATGAGGAGGAGCACCGGAAATTTCTTGAAGGACTGGAGAAGCTGGGGAAGGGTAATTGGAGAGGCATTTCTAAACATTTTGTTACAACAAGAACACCATCCCAAGTGGCTAGTCATGCACAAAAATATTTTTTGCGTCAAACTAGCTTCAATAAAAGAAAGCGCCGTCGCAGCCTCTTTGATGTGGGAAGATATGAAACCACAACTACACTTGAACCATTAAATACTTGTTTAAAGGCAAGTGGTCAATTTGGGTCCCTATTTGGGACTATAATTACTTGTCCTCAGTGGGTTTCTTACAAACATTCAGTGATGAATTGGGCCACCACTTCAACAAACTACACTCATCAAAGTGCTGCCCCAGATCTAGAACTCAAGCTTGCTGTTCCCAAACAAACAGAGCCATGCGAAAGAACTTAA 624 0.4151 MKRRSLSMNYHLVSSRITSSSPSYNFLLGGGVDENSDKAISDGYIANVGGGGLTSTTRHQERKKGVPWNEEEHRKFLEGLEKLGKGNWRGISKHFVTTRTPSQVASHAQKYFLRQTSFNKRKRRRSLFDVGRYETTTTLEPLNTCLKASGQFGSLFGTIITCPQWVSYKHSVMNWATTSTNYTHQSAAPDLELKLAVPKQTEPCERT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02197 207 ProSiteProfiles Myb-like domain profile. 60 112 IPR001005 -
Gma17g02197 207 Gene3D - 66 118 - -
Gma17g02197 207 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 141 - -
Gma17g02197 207 PANTHER TRANSCRIPTION FACTOR KUA1 3 141 - -
Gma17g02197 207 CDD SANT 67 112 IPR001005 -
Gma17g02197 207 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Gma17g02197 207 SMART sant 64 114 IPR001005 -
Gma17g02197 207 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma17g02197 207 ProSiteProfiles SANT domain profile. 68 116 IPR017884 -
Gma17g02197 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 116 IPR017930 -
Gma17g02197 207 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 115 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02197 Gma-Chr17 39672967 39674977 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma17g02197 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02197 - - gmx:102666362 427.557