Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02196 ATGTCGCGAGCAAGATCACGCTCACCGTCACCGTGCTGCGGTGACACTCACTTAGTGCTGCTGCTGCCTGTGATGCTCGCTGTTTTCTTCCACTCGCTCCTTCTGCTTCCTCACTCCTCGCTCGCTATTCGCCCTACCGAGTCGGATCGGATCGAACTCGCCAACGCGACCGAGTCCAGCAGCAACGCCTCCCTCTCGCGCCCTCGCGAAGGAACCTTCGCCGACATGATTGATCGCGCGCTCGAGCACGAGTTCACCGAGAACGACCAGAATGAAGCGCCTGATCCGGGAAGCTTCAACAACAGTGTAGCAGAACAACAGGCTGTTCTGGAAACTGTGGCCAGAGTCACACCAAACAAGAATGACACGAAAGATGAAAAGTCATTTCAACTACATCATGTATTCAATAGAGCTGAGGAAACCCCAATGTTGATAGATCGAAAGGACAATGTCTTTATCATTTCTAACTTTAAATCCAAGTATCCCGTGCTCCAGCTAGATTTACGATTGATTTCAGACCTGGTAGTTGCTATTGTTTCAGCAACTTGTGGTGGCGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACCGGATATCTTTTAGCTGGCTCCATAGTTGGACCTGGCGGCTTTAACTTCATCAGTGAAATGGTGCAGGTGGAAACAGTGGCACAATTTGGGGTAATATTCCTTTTGTTTGCATTGGGCTTGGAGTTCTCCACAACAAAGCTTCGAGTTGTTCGAGCTGTTGCTGTTCTTGGAGGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGGCTTACAGTATCACTATGTGGTGGTAAAGCTTCAGAAGGGGTTTTTGTTGGTGCTTTCCTTTCCATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAACACCACTAATGCTCTTCATGGACAAGTCACAATTGGGACCCTGATTTTGCAGGATTGTGCTGTTGGATTGCTCTTTGCATTGCTTCCAGTTCTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACCAAGCTGTTGGTGACATTAATTGCATTCCTCTCTGTTCTGTCAATATTGTCTCGCACTTGCCTTCCATGGTTGCTTAAGCTGATGATAAGCCTCTCATCACAGACAAATGAACTCTATCAATTGGCATCAGTTGCATTCTGCTTGCTAGTAGCCTGGTGTAGCGATAAGCTGGGACTAAGTCTAGAACTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATTTGGCTCAACATACACTAGAGCAAATTGAACCTATTCGCAATCTTTTTGCTGCTCTTTTCCTTGCCAGCATTGGAATGCTGATTCATGTTCATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCTGTAATATTGGTGATTGTTATAAAAACAATCATAATTGCATCTGTTGTGAAAGGATTTGGTTACAATAACAAGACTTCTATACTTGTTGGAATGTCGATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAACCTTCATCTAGTTGAGGGTAAATTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACAACTCCTTTACTTTTCAAGCTAATTCCTGCTGTAGTGCATCTTGGTGTCCTACTGAGATGGTTCTCTCCTGATAGTTCAGTGGAGATTGGATATAAGCTAGATAACCTCCGCTCAGATAGTGGTAAGCAGCGGATAATTTTGATGGACCAAGAATCTCATGATTCTTAA 1782 0.4478 MSRARSRSPSPCCGDTHLVLLLPVMLAVFFHSLLLLPHSSLAIRPTESDRIELANATESSSNASLSRPREGTFADMIDRALEHEFTENDQNEAPDPGSFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRAEETPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLSILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSILVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSSVEIGYKLDNLRSDSGKQRIILMDQESHDS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02196 593 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 17 593 IPR045158 GO:0015386|GO:0071805|GO:1902600
Gma17g02196 593 Pfam Sodium/hydrogen exchanger family 175 544 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma17g02196 593 Gene3D - 168 551 IPR038770 -
Gma17g02196 593 PANTHER K(+) EFFLUX ANTIPORTER 6 17 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02196 Gma-Chr17 39657421 39668135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02196 67 593 Antiporters AT5G11800 82.176 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02196 - - gmx:100811030 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02196 17 39657421 39668135 Gma14g00853 14 9159771 9170914 GST