Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02187 ATGTTCCTATTTGAGGATCTCTGGTCCCTCCCGCGCCTCTTCTCAGAGTCGCTTAATTTACAGTCTTTACGCGAATCCTTTACGAGCTCGAGCTGTGACAGAACGGAGTCGGAGCAATGCCGCGACGAGTCGGCGGCGATGGTTCTGAAATTCGTGGCGGTGGCGTCGATTCTGGTCGCCGGATTCGGGGGAGTCTCGATTCCGCTGGTCGGGAAGTCGCGGCGGTTTCTTCGACCGGACGGCGACGTTTTCGCGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTTTAGCGACGGGGTTCGTCCACATGCTGAGGGACTCGTGGGACGCGCTTCGGGAGCCGTGCTTGGGGACGCACTCGCGCGCGTGGGCGAAGTTTCCCTTCACCGGTTTCTTCGCCATGGTGTCAGCGCTCTTTACTCTACTGGTTGACTTTTTAGCGACGGAATATTACGAGCGCAGAGAGGCGCGTGGGCGCGTGGAGCGAGGGAAGGTTGTTGATTATGATGAAGGTTGTGACGAGGCGTTGTTGGAAACGGGAATCGTGGAGGTTAAGGATCTTGGGCGAGGGGGAAGACACTCCCACTCTCACGACGGCGATGATGTGGAAAGTAGTGTTCGACACGTCGTCGTTTCACAGGTATTGGAACTTGGGATTGTATCACATTCGATGATAATTGGGTTATCTCTAGGAGTTTCACAAAGTCCCTGTACCATGAAACCCCTAATTGTGGCATTATCCTTCCATCAATTCTTTGAAGGATTTGCACTTGGTGGTTGCATCTCCCAAGCCCAATTCAAGACCTTATCAGCAACAATAATGTCATGTTTTTTTGCACTAACAACGCCACTTGGTGTTGCTATTGGAGCTAGTGTTGCTTCAATTTTTAACCCTTACAGTCCAGTAGCACTCATCACTGAAGGCATCTTGGACGCCTTGTCAGCTGGGATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCAGATTTTCTTAGCAAGAAAATGCGTTGTAACTTTAGGTTTCAGATAATATGTTACTGTCTGCTTTTCCTTGGGGCTGGATTGATGTCTTCACTTGCAATTTGGGCATGA 1095 0.5105 MFLFEDLWSLPRLFSESLNLQSLRESFTSSSCDRTESEQCRDESAAMVLKFVAVASILVAGFGGVSIPLVGKSRRFLRPDGDVFAAAKAFAAGVILATGFVHMLRDSWDALREPCLGTHSRAWAKFPFTGFFAMVSALFTLLVDFLATEYYERREARGRVERGKVVDYDEGCDEALLETGIVEVKDLGRGGRHSHSHDGDDVESSVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMKPLIVALSFHQFFEGFALGGCISQAQFKTLSATIMSCFFALTTPLGVAIGASVASIFNPYSPVALITEGILDALSAGILVYMALVDLIAADFLSKKMRCNFRFQIICYCLLFLGAGLMSSLAIWA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02187 364 Pfam ZIP Zinc transporter 49 361 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gma17g02187 364 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 189 364 - -
Gma17g02187 364 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 28 163 - -
Gma17g02187 364 PANTHER ZINC/IRON TRANSPORTER 189 364 - -
Gma17g02187 364 PANTHER ZINC/IRON TRANSPORTER 28 163 - -
Gma17g02187 364 TIGRFAM zip: ZIP zinc/iron transport family 32 364 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02187 Gma-Chr17 39544536 39548071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02187 23 364 Inorganic Solute Cotransporters AT1G10970 59.574 6.83e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02187 K14709 - gmx:100809426 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02187 17 39544536 39548071 Gma14g00862 14 9247482 9250143 GST
Gma17g02187 17 39544536 39548071 Gma06g00467 06 3975806 3977691 PCT
Gma06g00467 06 3975806 3977691 Gma17g02187 17 39544536 39548071 PCT