Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02164 ATGATAGAACAGTTGAACAGCAAGTTCTTGAATCATTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGAGCTGCAATTAGAACTTACCTACTGGAAAGATCACGTGTAGTGCAGATAATGGATCCAGAGAGAAATTATCACTGCTTTTATCAGTTGTGTGCATGTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCAAGTCACTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTAAGCAATGCTGAAGAAAACCTGAAGACCAGAAGGGCAATGGATATTGTTGGCATCAGTCACGAGGATCAGGAAGCCATATTTCGTGTCTTAGCGGAAATTTTACATTTGGGAAACATTGAATTTTCACCTGGAAAAGAGCATGACTCATCGGGAGTAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTGATCTTTTCATagctcccaatccagggggctctgcttctccatttttccaggcagccttcattgctgcagttgatactgtttctgtgcccaatgactgcatataccactggtcgttgtccgccgctgtccactgctgtcctccgtcgtcaaccaccttccgccgcaAAACTGATCGGAGAACCCACCAGGAGAAGCGCTTTCTCCAGATCGGCCCATCCCTGAAGTTTCACCGCCAACCGCCATCGGACGCGCTGCCACTCGCTGTTTTTGTCTCCGGCGTGTGTAAGCCACGCGCCACCGTACAGGCCGTCTTTTTTGACGGCACCGCCACAGAACAGGTCACCAGTCCACCTCGGTTCTGTTCCAAGGGTTATTTTGCCCTAAAACAATGTCCTTTTGTGGCTGTTAAGAAACCCTAG 885 0.3605 MIEQLNSKFLNHFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQIMDPERNYHCFYQLCACERDAEKYKLGHPSHFHYLNQSKIYELDGVSNAEENLKTRRAMDIVGISHEDQEAIFRVLAEILHLGNIEFSPGKEHDSSGVKDEKSRFHMQMAADLFIAPNPGGSASPFFQAAFIAAVDTVSVPNDCIYHWSLSAAVHCCPPSSTTFRRKTDRRTHQEKRFLQIGPSLKFHRQPPSDALPLAVFVSGVCKPRATVQAVFFDGTATEQVTSPPRFCSKGYFALKQCPFVAVKKP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02164 294 PANTHER MYOSIN-15 12 159 - -
Gma17g02164 294 Pfam Myosin head (motor domain) 12 153 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma17g02164 294 Gene3D Kinesin motor domain 12 49 IPR036961 -
Gma17g02164 294 PANTHER MYOSIN 12 159 - -
Gma17g02164 294 Gene3D - 50 107 - -
Gma17g02164 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 157 IPR027417 -
Gma17g02164 294 Gene3D Myosin VI head, motor domain, U50 subdomain 109 157 - -
Gma17g02164 294 SMART MYSc_2a 4 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma17g02164 294 ProSiteProfiles Myosin motor domain profile. 1 294 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02164 Gma-Chr17 39259987 39263095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02164 11 158 Myosins gene family AT4G33200 78.378 1.61e-74 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02164 K10357 - gmx:100802502 324.709