Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02163 ATGAATCTGCGCCACGGCTCCAAGGTTTGGCTCGAGGACCGCGATTCGGCATGGCTCGCCGCCGAAGTGCTCGATTCTGACGGTAATCGCTTCTTGCTCGTCACCGATTCCGGCATGAAGCTTTTTGCTTCGCCGGAGAAGCTGTTTCCGAGGGATGCGGATGAAGAGGAGCACGGGGGATTTGAAGATATGACGAGGTTGGCGTACTTGAACGAGCCGGGagtgttgttcaatcttcggagaagatatgcgctcaatgatatttacACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACGCAGCTTCCTCATTTATATGATTCCCATATGATGGAGCAATATAAGGGAGCTCCATTGGGTGAGCTTAGCCCTCATGTTTTTGCCATTGCTGATGCATCTTATAGGTCATGA 420 0.4524 MNLRHGSKVWLEDRDSAWLAAEVLDSDGNRFLLVTDSGMKLFASPEKLFPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYALNDIYTYTGSILIAVNPFTQLPHLYDSHMMEQYKGAPLGELSPHVFAIADASYRS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02163 139 Gene3D Kinesin motor domain 8 139 IPR036961 -
Gma17g02163 139 PANTHER MYOSIN-17 6 138 - -
Gma17g02163 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 138 IPR027417 -
Gma17g02163 139 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma17g02163 139 Pfam Myosin head (motor domain) 62 139 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma17g02163 139 ProSiteProfiles Myosin motor domain profile. 59 139 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma17g02163 139 PANTHER MYOSIN 6 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02163 Gma-Chr17 39257699 39259856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02163 1 139 Myosins gene family AT4G33200 69.065 5.35e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02163 K10357 - gmx:100802502 283.493