Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02160 ATGGCATTTCGATTTGGAGTCCTTATTCTTGCTTTGGTTATTTGTTTGAATTTCAATTCTGTGGAATCTGATGATGGAGCAACGTTGTTAGAGATAAAGAAGTCATTTAGAGATGTGGATAACGTGCTCTATGATTGGACTGACTCACCATCATCAGATTATTGTGCCTGGAGAGGGATATCATGTGATAATGTTACCTTTAATGTTGTTGCACTCAATCTTTCAGGGTTGAATCTTGATGGTGAAATTTCACCTGCAATTGGGAAACTTCAGAGTTTGGTCTCAATTGACCTCAGAGAAAACAGGTTATCAGGGCAGATACCAGATGAGATTGGTGACTGTTCATCTTTAAAGAACTTGGACTTGTCATTTAATGAAATTAGAGGGGATATACCATTTTCTATTTCTAAGTTGAAACAGCTGGAGAATCTGATTTTGAAGAACAACCAATTGATTGGACCAATTCCTTCAACTTTGTCTCAGATTCCTGATTTGAAGATTCTAGACCTGGCTCAAAATAATCTTAGCGGAGAAATACCAAGGCTTATATATTGGAACGAAGTTTTGCAATATCTAGGCTTGAGAGGGAACAATTTGGTTGGTTCACTATCACCAGACATGTGCCAGTTAACTGGGCTGTGGTATTTTGATGTGAGAAACAATAGCCTGACAGGAAGTATTCCAGAGAACATAGGCAATTGTACTGCCTTCCAGGTCTTGTATGTAATCCAGTTGCATGACTTTGACATACCTTGTTCTTATTTTCTTTTTACCTTTCTAATCTCTTCTGTTGATGCCAGGGATTTATCCTACAACCAACTAACTGGAGAGATACCATTCAATATTGGATTCTTGCAAGTAGCAACTTTGTCCTTGCAAGGCAATAAACTCTCTGGACATATTCCACCGGTGATCGGTCTCATGCAAGCACTTGCTGTCCTAGACTTGAGCTGCAACTTGTTAAGTGGATCGATCCCTCCTATCTTGGGAAATTTGACTTACACAGAAAAATTGTACTTGCATGGAAACAAGCTGACTGGCTTCATCCCCCCAGAGCTTGGAAATATGTCAAAGCTTCACTATTTGGAACTGAATGATAACCATTTAAGTGGACATATCCCGCCCGAGCTTGGAAAGCTTACAGATCTGTTTGACTTAAATGTTGCAAACAACAATCTTGAGGGGCCAATTCCTAGTAATCTTAGCTCATGTAAAAATCTCAACAGCCTCAATGTGCATGGCAACAAGTTGAATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTGAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATTGGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGTTGAATCTAAGCAGAAACAATTTAACAGGAATTATTCCAGCAGAATTTGGAAATCTTAGAAGTGTTATGGAAATTGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGATGAACTTAGTCAGCTTCAAAACATGATATCCTTGAGACTTGAAAATAACAAATTGACTGGCGATGTGGCATCACTTTCAAATTGCATTAGTCTCTCTCTACTTAATGTGTCCTATAACAAACTATTTGGTGTTATCCCAACGAGTAACAACTTTACCAGGTTTCCCCCTGACAGTTTCATTGGAAACCCTGGTCTTTGTGGTAATTGGCTGAATTTGCCGTGTCATGGTGCTCGCCCTTCAGAGCGAGTTACATTATCTAAGGCTGCCATTCTTGGAATTACTCTTGGTGCCCTTGTGATTCTTCTTATGGTATTGCTGGCAGCTTGCCGACCACATAGTCCCTCTCCTTTTCCTGATGGATCATTTGACAAACCAGTTAATTTCTCCCCCCCAAAGCTAGTGATTCTTCATATGAATATGGCACTACATGTGTATGAAGATATCATGAGGATGACTGAAAACCTGAGTGAGAAGTATATAATTGGATATGGAGCATCAAGTACAGTTTATAAATGTGTTCTTAAGAATTGCAAGCCGGTGGCTATCAAGAGGATCTATTCTCACTATCCCCAATGTATTAAAGAATTTGAAACTGAACTTGAGACGGTTGGCAGCATCAAGCACCGGAATCTGGTCAGTCTCCAAGGTTATTCCTTGTCCCCATATGGGCATCTCCTGTTTTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGACCTACCAAGAAGAAAAAGCTTGACTGGGAGCTGCGTCTAAAAATAGCACTTGGAGCAGCACAAGGGCTTGCTTATCTACACCATGATTGCTGTCCTAGAATCATCCACAGAGATGTGAAATCATCTAACATTCTATTGGATGCAGACTTTGAGCCTCATCTCACTGATTTTGGCATTGCCAAAAGTCTCTGCCCCTCAAAGTCCCATACTTCTACTTACATAATGGGCACAATTGGCTATATAGACCCTGAGTATGCTAGAACTTCACGTCTCACTGAGAAGTCTGATGTGTACAGTTACGGTATTGTTTTACTTGAGTTGCTAACTGGAAGGAAAGCTGTTGACAATGAATCCAACCTCCACCATCTGATTTTGTCCAAGGCAGCAACCAATGCAGTGATGGAAACAGTTGATCCAGACATTACTGCCACATGCAAGGACCTAGGAGCTGTAAAAAAGGTTTATCAGCTTGCTCTATTATGCACAAAGAGGCAGCCAGCTGATAGGCCGACAATGCACGAAGTGACACGTGTACTCGGAAGCCTTGTGCTGTCAAACACCCCACCAAAGCAACTAGCTGCACTACCACCTGCTTCAAATCCATCTGCCAAAGTGCCATGCTACGTGGATGAGTATGCAAACCTCAAGACTCCACACTTGGTGAACTGCCCCTCAATGAGCACCTCAGATGCTCAACTCTTCCTCAAGTTTGGAGAAGTAATCTCTCAAAACAGTGAGTGA 3024 0.4117 MAFRFGVLILALVICLNFNSVESDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCAWRGISCDNVTFNVVALNLSGLNLDGEISPAIGKLQSLVSIDLRENRLSGQIPDEIGDCSSLKNLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPDLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTAFQVLYVIQLHDFDIPCSYFLFTFLISSVDARDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGHIPPVIGLMQALAVLDLSCNLLSGSIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMSKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPSNLSSCKNLNSLNVHGNKLNGSIPPSLQSLESMTSLNLSSNNLQGAIPIELSRIGNLDTLDISNNNLVGSIPSSLGDLEHLLKLNLSRNNLTGIIPAEFGNLRSVMEIDLSNNQLSGLIPDELSQLQNMISLRLENNKLTGDVASLSNCISLSLLNVSYNKLFGVIPTSNNFTRFPPDSFIGNPGLCGNWLNLPCHGARPSERVTLSKAAILGITLGALVILLMVLLAACRPHSPSPFPDGSFDKPVNFSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRIYSHYPQCIKEFETELETVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGPTKKKKLDWELRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKAATNAVMETVDPDITATCKDLGAVKKVYQLALLCTKRQPADRPTMHEVTRVLGSLVLSNTPPKQLAALPPASNPSAKVPCYVDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02160 1007 Gene3D Ribonuclease Inhibitor 184 303 IPR032675 -
Gma17g02160 1007 Gene3D Ribonuclease Inhibitor 22 183 IPR032675 -
Gma17g02160 1007 Gene3D Ribonuclease Inhibitor 316 596 IPR032675 -
Gma17g02160 1007 CDD STKc_IRAK 680 943 - -
Gma17g02160 1007 SUPERFAMILY L domain-like 24 260 - -
Gma17g02160 1007 Pfam Protein kinase domain 677 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02160 1007 Gene3D Phosphorylase Kinase; domain 1 648 749 - -
Gma17g02160 1007 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Gma17g02160 1007 Pfam Leucine rich repeat 454 513 IPR001611 GO:0005515
Gma17g02160 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 241 - -
Gma17g02160 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 263 994 - -
Gma17g02160 1007 ProSiteProfiles Protein kinase domain profile. 674 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02160 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Gma17g02160 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 263 994 - -
Gma17g02160 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 6 241 - -
Gma17g02160 1007 SMART LRR_typ_2 500 523 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 428 452 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 524 551 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 308 332 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 210 234 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 90 114 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 162 186 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 356 380 IPR003591 -
Gma17g02160 1007 SMART LRR_typ_2 476 499 IPR003591 -
Gma17g02160 1007 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Gma17g02160 1007 ProSitePatterns Protein kinases ATP-binding region signature. 680 702 IPR017441 GO:0005524
Gma17g02160 1007 ProSiteProfiles Leucine-rich repeat profile. 116 139 IPR001611 GO:0005515
Gma17g02160 1007 SUPERFAMILY L domain-like 252 585 - -
Gma17g02160 1007 SMART serkin_6 674 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02160 1007 Gene3D Transferase(Phosphotransferase) domain 1 750 951 - -
Gma17g02160 1007 SUPERFAMILY Protein kinase-like (PK-like) 652 940 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02160 Gma-Chr17 39220737 39228091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02160 285 591 Receptor kinase-like Gene Family AT5G07180 36.283 5.14e-44 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Gma17g02160 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02160 K20718 - gmx:100782307 1866.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02160 17 39220737 39228091 Gma17g02160 17 39220737 39228091 ECH
Gma17g02160 17 39220737 39228091 Gma14g00892 14 9827313 9835415 GST