Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02148 ATGAGTTCGATTCCAACAACCACCTACGAAGATTCTTCAGCAGTTAACATTTCAGAATTCCAACCTCAATCTCACGCACCGAAGGAAATTGAGTGGCACATGCTCGACAAGTCAAAGTTCTTCTTCCTGGGAGCAGCCTTGTTCTCCTCTCTCTCCGCCGCCCTCTACCCCGCCGTGGTCTTGAAGACACGTCAGCAAGTTTCCTCCGCCAAAATCTCGTGCCGCAACATGTCACGCGCCATCATTCGCTACGAGGGTTTCCGAGGTTTCTACCGAGGTTTCGGCACTTCCTTAATGGGAACAATCCCCGCACGTGCGCTTTACATGTCTGCGCTTGAAGTCACGAAGAGCAACGTCGGCACCGCCACCGCTCACTTGGGGTTTTCCGATGCGTCGGCCGCTGCCATCGCTAATGCCGCCGGAGGCGTAGCTTCCGCCATGGCGGCACAATTGGTGTGGACCCCAGTTGATGTCGTGAGCCAAAGACTCATGGTTCAAGAAAGCAACAAAATGTGTTACAGGAATGGTTTTGATGCATTTAGGAAAATTCTGGGTGTTGAAGGGCCAAGGGGGTTTTACAGAGGGTTTGGGGTTTCCATAGTGACTTATGCTCCCTCTAACGCAGTTTGGTGGGCTTCGTATTCAATGGTAAACAGGCTTATTTGGGGCGTGTTTGGTGGTTGTGGTAATTCAAATTTTGGACGCGATTCGAAGGTGATGGTGGGTGTGCAAGGGTTGAGTGCAGTTATGGCTAGTGGGGTTTCGACTATTGTGACTATGCCACTTGACACGATCAAGACGAGGTTGCAAGTGTTGGATGCAGAAGAGATTAATGGACGAAGGAGGCCATTGACTCTTGTGCAAGCGGTTCATAACTTGGTGAAGGAAGGGGGAATCTTGGCTTGTTACAGAGGCTTGGGACCAAGGTGGGCTTCTATGTCCATGTCTGCGGCAACCATGATTACTACCTATGAGTTCTTGAAACGCGTGTCTGCTAAGAATCTGGATAGATTCATTGTGTAG 1023 0.5034 MSSIPTTTYEDSSAVNISEFQPQSHAPKEIEWHMLDKSKFFFLGAALFSSLSAALYPAVVLKTRQQVSSAKISCRNMSRAIIRYEGFRGFYRGFGTSLMGTIPARALYMSALEVTKSNVGTATAHLGFSDASAAAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQESNKMCYRNGFDAFRKILGVEGPRGFYRGFGVSIVTYAPSNAVWWASYSMVNRLIWGVFGGCGNSNFGRDSKVMVGVQGLSAVMASGVSTIVTMPLDTIKTRLQVLDAEEINGRRRPLTLVQAVHNLVKEGGILACYRGLGPRWASMSMSAATMITTYEFLKRVSAKNLDRFIV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02148 340 Gene3D Mitochondrial carrier domain 229 338 IPR023395 -
Gma17g02148 340 Gene3D Mitochondrial carrier domain 4 223 IPR023395 -
Gma17g02148 340 Pfam Mitochondrial carrier protein 136 221 IPR018108 -
Gma17g02148 340 Pfam Mitochondrial carrier protein 243 334 IPR018108 -
Gma17g02148 340 Pfam Mitochondrial carrier protein 52 118 IPR018108 -
Gma17g02148 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 330 IPR018108 -
Gma17g02148 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 19 336 - -
Gma17g02148 340 SUPERFAMILY Mitochondrial carrier 33 327 IPR023395 -
Gma17g02148 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 118 IPR018108 -
Gma17g02148 340 PRINTS Mitochondrial carrier protein signature 91 109 IPR002067 GO:0055085
Gma17g02148 340 PRINTS Mitochondrial carrier protein signature 142 164 IPR002067 GO:0055085
Gma17g02148 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 19 336 - -
Gma17g02148 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 220 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02148 Gma-Chr17 38992568 38994591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02148 23 334 Chloroplast and Mitochondria Gene Families AT5G26200 65.015 6.50e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02148 K15121 - gmx:100797365 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02148 17 38992568 38994591 Gma17g02148 17 38992568 38994591 ECH