Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02145 ATGACAGACAAAATACCAAAACCACCACCACCAGATACACCTGACAGTGATGATTTCACCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGAAATTCGATGATAATCAGTGGATGCATGATGGTCTTGAGTCATTTGCTTCTGAGAATGTCTCAAACCAGGTTCATCAAGTCAGTAATGCAGGTGAGTTTGGAGGAGGAAGCAGCCACTTTGAAGGGTCTTCTAGCAAAGATACTAGCAGTGGACGTGAGAATAGGGAAGTTAGAGAGAGAGTTGCATTCAAAATAATGTCAGAGATTGAAGTTCTTGATGATGGCTACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAAAACAGTCCCAATCCAAGGAATTACTATAGGTGTTCAGTGGATGGATGCAACGTGAAAAAGAGAGTGGAGAGAGACAAGGATGACCCAAGGTATGTAATAACAACCTACGAAGGCAACCACACTCATCCAAGTTCTTCCTAG 495 0.4283 MTDKIPKPPPPDTPDSDDFTNQWPFELSEYLKFDDNQWMHDGLESFASENVSNQVHQVSNAGEFGGGSSHFEGSSSKDTSSGRENREVRERVAFKIMSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCNVKKRVERDKDDPRYVITTYEGNHTHPSSS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02145 164 MobiDBLite consensus disorder prediction 1 15 - -
Gma17g02145 164 MobiDBLite consensus disorder prediction 54 76 - -
Gma17g02145 164 MobiDBLite consensus disorder prediction 1 21 - -
Gma17g02145 164 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02145 164 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02145 164 SUPERFAMILY WRKY DNA-binding domain 96 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g02145 164 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02145 164 MobiDBLite consensus disorder prediction 54 88 - -
Gma17g02145 164 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 162 IPR044810 GO:0003700
Gma17g02145 164 Gene3D WRKY domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g02145 164 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02145 Gma-Chr17 38978469 38979981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02145 25 162 WRKY Transcription Factor Family AT5G26170 52.597 2.38e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g02145 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02145 - - gmx:100796836 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02145 17 38978469 38979981 Gma17g02145 17 38978469 38979981 ECH