Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma17g02145 | ATGACAGACAAAATACCAAAACCACCACCACCAGATACACCTGACAGTGATGATTTCACCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGAAATTCGATGATAATCAGTGGATGCATGATGGTCTTGAGTCATTTGCTTCTGAGAATGTCTCAAACCAGGTTCATCAAGTCAGTAATGCAGGTGAGTTTGGAGGAGGAAGCAGCCACTTTGAAGGGTCTTCTAGCAAAGATACTAGCAGTGGACGTGAGAATAGGGAAGTTAGAGAGAGAGTTGCATTCAAAATAATGTCAGAGATTGAAGTTCTTGATGATGGCTACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAAAACAGTCCCAATCCAAGGAATTACTATAGGTGTTCAGTGGATGGATGCAACGTGAAAAAGAGAGTGGAGAGAGACAAGGATGACCCAAGGTATGTAATAACAACCTACGAAGGCAACCACACTCATCCAAGTTCTTCCTAG | 495 | 0.4283 | MTDKIPKPPPPDTPDSDDFTNQWPFELSEYLKFDDNQWMHDGLESFASENVSNQVHQVSNAGEFGGGSSHFEGSSSKDTSSGRENREVRERVAFKIMSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCNVKKRVERDKDDPRYVITTYEGNHTHPSSS | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma17g02145 | 164 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Gma17g02145 | 164 | MobiDBLite | consensus disorder prediction | 54 | 76 | - | - | |
Gma17g02145 | 164 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Gma17g02145 | 164 | ProSiteProfiles | WRKY domain profile. | 98 | 163 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma17g02145 | 164 | SMART | WRKY_cls | 103 | 162 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma17g02145 | 164 | SUPERFAMILY | WRKY DNA-binding domain | 96 | 162 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma17g02145 | 164 | Pfam | WRKY DNA -binding domain | 104 | 161 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma17g02145 | 164 | MobiDBLite | consensus disorder prediction | 54 | 88 | - | - | |
Gma17g02145 | 164 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 162 | IPR044810 | GO:0003700 | |
Gma17g02145 | 164 | Gene3D | WRKY domain | 90 | 156 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma17g02145 | 164 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 1 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma17g02145 | Gma-Chr17 | 38978469 | 38979981 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma17g02145 | 25 | 162 | WRKY Transcription Factor Family | AT5G26170 | 52.597 | 2.38e-42 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gma17g02145 | WRKY | 2e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma17g02145 | - | - | gmx:100796836 | 315.079 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma17g02145 | 17 | 38978469 | 38979981 | Gma17g02145 | 17 | 38978469 | 38979981 | ECH |