Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02141 ATGTTACTGTTAGCTACCACGTCGTGTATTCCCTGCTTGAAAACTTTTCTTCTTTTGCACATCCTCATCCTTCCAATAATTGTTCAACCACTTTCCTTCAACATAACCAACTTTAACGATACTGAAAGCACAAACCTGATATTTGGTGGCGAATCCAGGATTATTATTCAGAACGGAACCATTGTTCTCAACTCAGACATCGGCAATGGAGTTGGACGAGCCACCTATGGCCAACCTCTGTGCTTCAAAAACTCTTCTAACGGACATGTCACAGATTTTTCTACTCGCTTTTCGTTCACCATTGATGTGTCCAACAAAACCTTTTTCGGTGATGGCTTTGCCTTCTACGTGGCACCTCATCCCTACCAGATTCCACTCAATTCAGGTGGCGGCCGCCTCGGCTTATACGATGATAACGCACCGGCACCACACAGTAACATCGTTGCTGTCGAATTTGACACTTATGTAAACCGTTATGTTGATCCAAATATGAGGCACGTGGGGATCAACAACAACTCTGCGATGTCTCTTGCTTATGACAGGTTTGATATTGAGAGCAACATAGGGAAGATGGGGCATGCGTTGATAACTTACAATGCTTCTGCCAAACTCCTTTCTGTGTCGTGGTTCTTTGAGGGAACTAGTTCTGGTTTTACACCTAATGCTAATTCTCTTTCGTACCGTATTGACCTAGGGGAAGCTCTACCAGAGTGGGTCACTATTGGGTTTTCGGGTGCAACCGGCTCGTTAAAGGAGGAAAATGTTATTCATTCCTGGGAATTCAGTTCAACCATGAACTCTATGCATTCAGAGGTAAGCAATGAAAATGATGATAGGATCATGGTTAAATACAAGTTTCAAGTCAAAGCAGTAGTTGTTGCGGTGATGACTACTTGTGTTTTTTTTGTGCTCGTGATTATTGGAGTTTATTGGTTGATCATCAAGAAGAGAAGAAGTGAGGATGGTTATGATCTGGATAGGGAAACTATACCTAGAAGATTTTATTACAAAGAACTAGTAGCAGCCACCAATGGATTTGCTGATGATAGAAAGCTTGGACGAGGAGGCTCGGGACAGGTTTACAAAGGGATTCTGAGTTACTTAGGAAGGGATGTTGCTGTCAAAAGGATTTTCACTAACTTGGAAAATTCCGAGAGAGTTTTCATCAACGAGGTTAGGATCATAAGCCGTCTTATACATAGAAACTTGGTGCAGTTCATAGGGTGGTGCCATGAGGAAGGAGAGTTTGTGTTGGTTTTTGAGTACATGCCTAATGGAAGCCTGGACACAATCTCTTTGGGGAGAAAAAAGCTTTGGCGTGGGATGTATAAGGTAGCTTTAAGCGTGACTTTAGCACTTCGTTATCTTCATGAGGATGCAGAGCAATGTGTTCTTCATAGGGATATTAAGTCAGCAAACGTGTTGTTGGACACGAATTTTAACACCAAACTTGGTGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAGAACTCAAAGGACAAGGGTGGTGGGGACTTATGGGTACCTTGCTCCAGAATATATCAATGGAGGCAGGGCTAGTAAGGAATCAGACATTTATAGTTTTGGTGTTTTGGCTCTTGAAATTGCATGTGGAAGGAGGACTTACAAAGATGGGGAGTTTCATGTGCCTCTTGTGAAATGGGTGTGGCAACAATATGTGGGAGGGAATGTTCTGAATGTTGTTGATGAGAGACTAAACAAGGAGTTTAATGTGAATGAAATGACAAGCTTGATTATTGTGGGGTTGTGGTGTACTAACCCAAATGACAAGGAAAGGCCCAAGGCTGCACAAGTAATCAAGGTTCTTCAGCTTGAAGCGCCATTGCCAGTGCTACCACTTGATATGCATGATCGTCCTCCTCCTTCTCTAGCTATGCACGCACAACAACCCACTAATTATTCCTCACAATCACTACCTTTCACTAACAGCATTATAAGTGTTGGACGTTAA 1977 0.4269 MLLLATTSCIPCLKTFLLLHILILPIIVQPLSFNITNFNDTESTNLIFGGESRIIIQNGTIVLNSDIGNGVGRATYGQPLCFKNSSNGHVTDFSTRFSFTIDVSNKTFFGDGFAFYVAPHPYQIPLNSGGGRLGLYDDNAPAPHSNIVAVEFDTYVNRYVDPNMRHVGINNNSAMSLAYDRFDIESNIGKMGHALITYNASAKLLSVSWFFEGTSSGFTPNANSLSYRIDLGEALPEWVTIGFSGATGSLKEENVIHSWEFSSTMNSMHSEVSNENDDRIMVKYKFQVKAVVVAVMTTCVFFVLVIIGVYWLIIKKRRSEDGYDLDRETIPRRFYYKELVAATNGFADDRKLGRGGSGQVYKGILSYLGRDVAVKRIFTNLENSERVFINEVRIISRLIHRNLVQFIGWCHEEGEFVLVFEYMPNGSLDTISLGRKKLWRGMYKVALSVTLALRYLHEDAEQCVLHRDIKSANVLLDTNFNTKLGDFGMAKLVDPRLRTQRTRVVGTYGYLAPEYINGGRASKESDIYSFGVLALEIACGRRTYKDGEFHVPLVKWVWQQYVGGNVLNVVDERLNKEFNVNEMTSLIIVGLWCTNPNDKERPKAAQVIKVLQLEAPLPVLPLDMHDRPPPSLAMHAQQPTNYSSQSLPFTNSIISVGR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02141 658 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02141 658 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Gma17g02141 658 Gene3D Phosphorylase Kinase; domain 1 314 422 - -
Gma17g02141 658 SUPERFAMILY Protein kinase-like (PK-like) 329 633 IPR011009 -
Gma17g02141 658 PANTHER - 31 627 - -
Gma17g02141 658 PANTHER LECTIN RECEPTOR KINASE 31 627 - -
Gma17g02141 658 CDD lectin_legume_LecRK_Arcelin_ConA 31 265 IPR001220 GO:0030246
Gma17g02141 658 Pfam Legume lectin domain 31 272 IPR001220 GO:0030246
Gma17g02141 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 269 IPR013320 -
Gma17g02141 658 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Gma17g02141 658 SMART serkin_6 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02141 658 Gene3D - 29 288 - -
Gma17g02141 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Gma17g02141 658 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02141 658 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Gma17g02141 658 Gene3D Transferase(Phosphotransferase) domain 1 423 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02141 Gma-Chr17 38958592 38960990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02141 16 624 Receptor kinase-like Gene Family AT5G10530 43.402 5.84e-160 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma17g02141 Pkinase 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02141 - - gmx:100800327 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02141 17 38958592 38960990 Gma14g00918 14 10318334 10320667 GST