Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02139 ATGATCCTTCTTCCAATAGTTCAACCACTCTCCTTCAACATAACTAACTTTAGCAACACCGAAAGCGCAAGCCCCATTGAATACGCCGGCGTAGCCAAGACTGAGAACGGAACCGTTGTGCTGAACCCACTCATCAATGGCGGAGTTGGACGAGCCATCTGTGTCCAACCACTACGCCTGAAAAAATCTTCTAACGAAGATGTCACAGACTTTTCAACTCGTTTTTCATTCTCTATCAACGCGCCTAATAAAACAAACTACGCTGATGGCTTTGCCTTCTATGTGGCACCACTTGCCTTGGCGTACCAAATTCCACCCAGTTCAGGTGGTTTACGTCTCGGGTTATACGATGACAGCAAACCCCAAAATAGCTTCGTTGCTGTTGAATTTGACCCTTATGTAAACGAGTTCGACCCACCAGTGCAGCATGTAGGGATCAACAATAACTCTATTGCATCCCTTGATTATAAGAAGTTTGATATTGAGAGAAACATAGGGAAGATGGGGCATGCGTTGATAACCTACAATGCTTCTGCCAAACTCCTTTCTGTCTCGTGGTTCTTTGATGGAACTAGTTCTGACGCTAATTCTCTTTCGCACCAGATTGACCTAGGGGAAATTATTATGTCAGACTGGGTCGCTGTAGGGTTTTCGGGATCAACCGGCACGACCAAAGAGGAAAATGTTATCCATTCATGGGAATTCAGTTCCAGTCTTGATTTAAGTTCCACCGATCCAGAGGTAAACAACGAAAATGATGATGACAACAAGATTACCAAATACAAGGTTCAGGTCAAAGTAGTAGTTGTTGTTGCAGTGGTTTGTTCTATTATTGTTGTTATCGTGGTTATTAGTGTTACTTGGTTGATCATCAAGAAGAGAAGAAGCGGTGATGGTTTTGGTTTGGATAGAGCAGCTATTCCAAGAAGGTTTGGTTATAAGGAATTAGTTGCAGCTACCAACGGGTTTGCAGATGATAGAAGGCTCGGAGAAGGAGGCTATGGACAAGTCTACAAAGGGTTTCTGAGTGATTTAGGGCGCGTGGTTGCGGTGAAAAGGATCTTTTCTGATGTTGAAGATTATGAGGAAATATTCACAAACGAGGTGAAGATTATAAGTCGTCTTATGCATAGAAACCTTGTGCAGTTCATGGGGTGGTGCCACGAGCAAGGGGAGGTATTACTGGTTTTTGAATACATGGTTAATGGAAGCCTTGACACTCATTTATTTGGTAGCAGAAGAACTTTGGCATGGGGTGTGAGATACAAGGTGGTGTTAGGTGTGGCGAGAGCACTTCGATATCTTCATGAAGACGCGGTGCAGTGTGTTCTTCATAGAGATATTAAGTCAGGTAATGTTTTGTTGGACACAGATTTCAATGCTAAGGTTAGTGACTTTGGGATGGCGAAATTGGTGGATCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACATATGGGTACCTGGCTCCTGAATATGTAAAGGAAGGGAGGGCTAGCAAGGAATCTGACATGTACGGTTTTGGAGTTTTGGCTTTGGAAATAGCATCTGGAATAAGGACTTACCGGGATGGGGAGAATAATCATGTGCCTTTGACGATTTGGGTGTGGAAACATTACGAGGATGGAAATGTTTTGAATGTTGCCGATAAGGGATTGAACGGTGATTATGATGTGAATGAAATGACTTGCTTGCTCACTGTGGGATTATGGTGTACCCTACAAGAACACAAGAAAAGGCCAAATGCTGAACAGGTTATTAGTGTTCTTAAGCAAGAAAAACCATTGCCAGTGCTTTCAGCAATATGA 1812 0.4327 MILLPIVQPLSFNITNFSNTESASPIEYAGVAKTENGTVVLNPLINGGVGRAICVQPLRLKKSSNEDVTDFSTRFSFSINAPNKTNYADGFAFYVAPLALAYQIPPSSGGLRLGLYDDSKPQNSFVAVEFDPYVNEFDPPVQHVGINNNSIASLDYKKFDIERNIGKMGHALITYNASAKLLSVSWFFDGTSSDANSLSHQIDLGEIIMSDWVAVGFSGSTGTTKEENVIHSWEFSSSLDLSSTDPEVNNENDDDNKITKYKVQVKVVVVVAVVCSIIVVIVVISVTWLIIKKRRSGDGFGLDRAAIPRRFGYKELVAATNGFADDRRLGEGGYGQVYKGFLSDLGRVVAVKRIFSDVEDYEEIFTNEVKIISRLMHRNLVQFMGWCHEQGEVLLVFEYMVNGSLDTHLFGSRRTLAWGVRYKVVLGVARALRYLHEDAVQCVLHRDIKSGNVLLDTDFNAKVSDFGMAKLVDPRLRTQKTKVVGTYGYLAPEYVKEGRASKESDMYGFGVLALEIASGIRTYRDGENNHVPLTIWVWKHYEDGNVLNVADKGLNGDYDVNEMTCLLTVGLWCTLQEHKKRPNAEQVISVLKQEKPLPVLSAI 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02139 603 Pfam Protein kinase domain 324 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02139 603 Gene3D - 8 261 - -
Gma17g02139 603 SUPERFAMILY Protein kinase-like (PK-like) 308 591 IPR011009 -
Gma17g02139 603 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 246 IPR013320 -
Gma17g02139 603 ProSiteProfiles Protein kinase domain profile. 323 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02139 603 CDD lectin_legume_LecRK_Arcelin_ConA 10 235 IPR001220 GO:0030246
Gma17g02139 603 Pfam Legume lectin domain 10 243 IPR001220 GO:0030246
Gma17g02139 603 SMART serkin_6 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02139 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Gma17g02139 603 Gene3D Transferase(Phosphotransferase) domain 1 400 601 - -
Gma17g02139 603 Gene3D Phosphorylase Kinase; domain 1 308 399 - -
Gma17g02139 603 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Gma17g02139 603 PANTHER - 9 601 - -
Gma17g02139 603 PANTHER LECTIN RECEPTOR KINASE 9 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02139 Gma-Chr17 38903288 38905099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02139 1 600 Receptor kinase-like Gene Family AT5G10530 41.026 9.22e-152 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma17g02139 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02139 - - gmx:100795245 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02139 17 38903288 38905099 Gma14g00924 14 10385033 10393229 GST