Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02135 ATGGGAACGAATCTCAGCACTCCCAAAACTGAGAAGTCTTCTGATGATGGTGAAAATGAGCATCTTAGATATGGTTTATCATCTATGCAAGGCTGGCGTGCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCACTTCCTTTTTTGGTGTTTATGATGGTCATGGAGGTAAAGTGGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAGCAGGTGCTCAAGAATGAAGCATACATAGCTGGAGATATAGGAACCTCTCTTAAGGAATCATTTTTCAGAATGGACGACATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTTTTGGGTGATAAGATAGACAAGTTTAATGGTAAGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGACATAGTAAGGAGCAAGATGATACTTGGGCCTTTGAGGAGGGCCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCATGTGTTGCAATTATTAGAAACAACAAACTTTTTGTAGCAAATGCCGGTGATTCACGTTGTGTAGTATGTAGGAAGGGTCAGGCGTATGATTTGTCGATAGATCATAAACCTGATCTTGAGATTGAGAAGGAAAGAATCGTAAAAGCTGGTGGTTTTATTCATGCGGGACGAGTTAATGGGAGTTTAAGCCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAGATTCCTTTCTGCTGAAAAGCAAATGGTGACAGCCAATCCAGACATAAATACTGTTGAACTTTGTGATGAAGATGAATTTATAGTGCTGGCTTGTGATGGCATATGGGATTGCTTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAACTAAACTTTCTGCCGTTTGCGAAAGAGTACTAGATCAATGTTTGGCACCAACAATTACTGTTGGTGATGGATGTGATAACATGACCATGATTTTGGTGCAGTTCAAAAAACTGGCCCAATCAAGTGCACCGGCATAA 1020 0.4147 MGTNLSTPKTEKSSDDGENEHLRYGLSSMQGWRATMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYIAGDIGTSLKESFFRMDDMMRGQRGWRELAVLGDKIDKFNGKIEGLIWSPRSRHSKEQDDTWAFEEGPHSNFAGPTSGSTACVAIIRNNKLFVANAGDSRCVVCRKGQAYDLSIDHKPDLEIEKERIVKAGGFIHAGRVNGSLSLARAIGDMEFKQNRFLSAEKQMVTANPDINTVELCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDQCLAPTITVGDGCDNMTMILVQFKKLAQSSAPA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02135 339 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Gma17g02135 339 Pfam Protein phosphatase 2C 140 312 IPR001932 -
Gma17g02135 339 Gene3D - 1 330 IPR036457 -
Gma17g02135 339 MobiDBLite consensus disorder prediction 1 20 - -
Gma17g02135 339 PANTHER PROTEIN PHOSPHATASE 2C 1 335 IPR015655 GO:0004722|GO:0006470
Gma17g02135 339 CDD PP2Cc 23 329 IPR001932 -
Gma17g02135 339 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Gma17g02135 339 SMART PP2C_SIG_2 28 329 IPR001932 -
Gma17g02135 339 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Gma17g02135 339 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 335 - -
Gma17g02135 339 SUPERFAMILY PP2C-like 4 331 IPR036457 -
Gma17g02135 339 SMART PP2C_4 13 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02135 Gma-Chr17 38865506 38871460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02135 1 331 PP2C-type Phosphatase Gene Family AT2G25070 76.133 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02135 K17499 - gmx:100793667 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02135 17 38865506 38871460 Gma17g02135 17 38865506 38871460 ECH
Gma17g02135 17 38865506 38871460 Gma14g00928 14 10456505 10462445 GST
Gma17g02135 17 38865506 38871460 Gma04g00558 04 5018138 5025696 PCT
Gma17g02135 17 38865506 38871460 Gma06g00546 06 4827658 4838100 PCT
Gma04g00558 04 5018138 5025696 Gma17g02135 17 38865506 38871460 PCT
Gma06g00546 06 4827658 4838100 Gma17g02135 17 38865506 38871460 PCT