Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma17g02135 | ATGGGAACGAATCTCAGCACTCCCAAAACTGAGAAGTCTTCTGATGATGGTGAAAATGAGCATCTTAGATATGGTTTATCATCTATGCAAGGCTGGCGTGCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCACTTCCTTTTTTGGTGTTTATGATGGTCATGGAGGTAAAGTGGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAGCAGGTGCTCAAGAATGAAGCATACATAGCTGGAGATATAGGAACCTCTCTTAAGGAATCATTTTTCAGAATGGACGACATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTTTTGGGTGATAAGATAGACAAGTTTAATGGTAAGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGACATAGTAAGGAGCAAGATGATACTTGGGCCTTTGAGGAGGGCCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCATGTGTTGCAATTATTAGAAACAACAAACTTTTTGTAGCAAATGCCGGTGATTCACGTTGTGTAGTATGTAGGAAGGGTCAGGCGTATGATTTGTCGATAGATCATAAACCTGATCTTGAGATTGAGAAGGAAAGAATCGTAAAAGCTGGTGGTTTTATTCATGCGGGACGAGTTAATGGGAGTTTAAGCCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAGATTCCTTTCTGCTGAAAAGCAAATGGTGACAGCCAATCCAGACATAAATACTGTTGAACTTTGTGATGAAGATGAATTTATAGTGCTGGCTTGTGATGGCATATGGGATTGCTTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAACTAAACTTTCTGCCGTTTGCGAAAGAGTACTAGATCAATGTTTGGCACCAACAATTACTGTTGGTGATGGATGTGATAACATGACCATGATTTTGGTGCAGTTCAAAAAACTGGCCCAATCAAGTGCACCGGCATAA | 1020 | 0.4147 | MGTNLSTPKTEKSSDDGENEHLRYGLSSMQGWRATMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYIAGDIGTSLKESFFRMDDMMRGQRGWRELAVLGDKIDKFNGKIEGLIWSPRSRHSKEQDDTWAFEEGPHSNFAGPTSGSTACVAIIRNNKLFVANAGDSRCVVCRKGQAYDLSIDHKPDLEIEKERIVKAGGFIHAGRVNGSLSLARAIGDMEFKQNRFLSAEKQMVTANPDINTVELCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDQCLAPTITVGDGCDNMTMILVQFKKLAQSSAPA | 339 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma17g02135 | 339 | Pfam | Protein phosphatase 2C | 23 | 103 | IPR001932 | - | |
Gma17g02135 | 339 | Pfam | Protein phosphatase 2C | 140 | 312 | IPR001932 | - | |
Gma17g02135 | 339 | Gene3D | - | 1 | 330 | IPR036457 | - | |
Gma17g02135 | 339 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Gma17g02135 | 339 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 335 | IPR015655 | GO:0004722|GO:0006470 | |
Gma17g02135 | 339 | CDD | PP2Cc | 23 | 329 | IPR001932 | - | |
Gma17g02135 | 339 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Gma17g02135 | 339 | SMART | PP2C_SIG_2 | 28 | 329 | IPR001932 | - | |
Gma17g02135 | 339 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 329 | IPR001932 | - | |
Gma17g02135 | 339 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 335 | - | - | |
Gma17g02135 | 339 | SUPERFAMILY | PP2C-like | 4 | 331 | IPR036457 | - | |
Gma17g02135 | 339 | SMART | PP2C_4 | 13 | 327 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma17g02135 | Gma-Chr17 | 38865506 | 38871460 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma17g02135 | 1 | 331 | PP2C-type Phosphatase Gene Family | AT2G25070 | 76.133 | 0.0 | 552 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma17g02135 | K17499 | - | gmx:100793667 | 681.789 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma17g02135 | 17 | 38865506 | 38871460 | Gma17g02135 | 17 | 38865506 | 38871460 | ECH | |
Gma17g02135 | 17 | 38865506 | 38871460 | Gma14g00928 | 14 | 10456505 | 10462445 | GST | |
Gma17g02135 | 17 | 38865506 | 38871460 | Gma04g00558 | 04 | 5018138 | 5025696 | PCT | |
Gma17g02135 | 17 | 38865506 | 38871460 | Gma06g00546 | 06 | 4827658 | 4838100 | PCT | |
Gma04g00558 | 04 | 5018138 | 5025696 | Gma17g02135 | 17 | 38865506 | 38871460 | PCT | |
Gma06g00546 | 06 | 4827658 | 4838100 | Gma17g02135 | 17 | 38865506 | 38871460 | PCT |