Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02132 ATGAGATCATCATACATGCAGAAAAACCTTTCTTCCTCTTTTCCCTCAGCATCATCATCATCATGGTTTGAGGTGTATGCTGCCATCTCCACATTCATGATGCTCCTAAGAACATCACTCAATGATCTCATACCGCGCCAAATTCGATCCTTCGTTATCTCAAAGCTAAAGAGTTTCTTCTCAGAGAGACAATTGCAACACAACCATGAGGTCTCACTTCATATCAACCAGTTTTGGGATCGCCAAACGAACCAACTCTTCCAAGCTGCCCAAGAGTATCTCCCTGATAGGATAACACACTCTTACAGATCCCTCAAAGTTGGCAAACTAATGCAGCATAAGAACATTGTAGTGGCCTTGGATGGAAAGCAAGAGGTGGTGGATCAATTTGAAGACATCAAACTTTTAGAGTGGAAGTTGGTTGAAAGTTCCAAGGAGGATTCTGATCATCATCCAAAGTCAAACGAGAAGCATTCACTTACACTAACCTTTGATGAGAAGCACAGAGAAAAAATAATGAACAAGTACATTCCACATGTTCTAAGCACTTACCAAGCCATGCAGGTAGCAAAAAGGACCATCAAGATCCATTCCATGGGGGGTGGTAGTAGGCACTGCTGGCAGAAGAGTGAGTTAACAcatccagcctcattcaacacacttgcattggattttcagcaaaagcatgccataattgatgatttggataggtttttgagaagaaaagagttgtataagaaagttggtaagccttggaaacgtggctacctcttgtatgggcctcctgggacaggaaaatctagccttgttgcagctatggctaactatttgaagtttgatgtgtatgatttggagctaaGTTCTTTGTGTTCTAGCTCGGGCATCATGCGTGCCTTGAGGGACACGTCTAACCGTTCCATTGCTGTGATTGAAGACATAGATTGCAACAGGAGAGGTGTTAACACAAAGAAGTTTACTTTATCGGGTCTTCTTAACTACATGGATGGTTTATGGTTTAGTGGTGGAGAGGAGCGAATTATAATCTTCACTACTAACCACAGAGAAAGAATTGACCCTGCATTGCTACGCCCTGGACGTATGGACATGCACATCCACTTGTCCTTCCTCAAAGGCATGGCATTTCAAGCCCTTGCTTCCAATTATTTAGGCATTGAAGGATATCATCCACTCTTTGAACAAATCAAAGAGCTATTGGAGAAAATAGAAGTCACACCTGCAGTAGTGGCAGAACAACTAATGAGAAATGAAGATCCTGATGTTGCTTTGGAAGCACTTGTTAAATTTCTCAAAGAAATGGACAAGGAAAAAGCATGCATTTAG 1341 0.352 MRSSYMQKNLSSSFPSASSSSWFEVYAAISTFMMLLRTSLNDLIPRQIRSFVISKLKSFFSERQLQHNHEVSLHINQFWDRQTNQLFQAAQEYLPDRITHSYRSLKVGKLMQHKNIVVALDGKQEVVDQFEDIKLLEWKLVESSKEDSDHHPKSNEKHSLTLTFDEKHREKIMNKYIPHVLSTYQAMQVAKRTIKIHSMGGGSRHCWQKSELTHPASFNTLALDFQQKHAIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLELSSLCSSSGIMRALRDTSNRSIAVIEDIDCNRRGVNTKKFTLSGLLNYMDGLWFSGGEERIIIFTTNHRERIDPALLRPGRMDMHIHLSFLKGMAFQALASNYLGIEGYHPLFEQIKELLEKIEVTPAVVAEQLMRNEDPDVALEALVKFLKEMDKEKACI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02132 446 PANTHER BCS1 AAA-TYPE ATPASE 15 443 - -
Gma17g02132 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 424 IPR027417 -
Gma17g02132 446 Pfam Domain associated at C-terminal with AAA 44 141 IPR025753 -
Gma17g02132 446 Pfam ATPase family associated with various cellular activities (AAA) 257 373 IPR003959 GO:0005524|GO:0016887
Gma17g02132 446 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 443 - -
Gma17g02132 446 Gene3D - 372 439 - -
Gma17g02132 446 ProSitePatterns AAA-protein family signature. 345 363 IPR003960 GO:0005524|GO:0016887
Gma17g02132 446 CDD AAA 241 374 - -
Gma17g02132 446 Gene3D - 207 371 IPR027417 -
Gma17g02132 446 SMART AAA_5 252 377 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02132 Gma-Chr17 38849017 38851968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02132 225 373 Calmodulin-binding Proteins AT3G56690 29.012 1.69e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02132 - K08900 gmx:100787726 610.912