Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02122 ATGGCATTGTTCCGCAAATTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGAGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGATGAATATAGAGTGTATATAGGAGGAATAATTGGGCAACTTCGTGGTCACTTCCCCGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGATAGCCAAAGCCAGATTTCAAACATTTTGTGTGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGTTGCCCGCTACTTACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCACTGCGAACGAGGTGGTTGGCCATTATTAGCGTTTATGCTAGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGATATGATATACAAGCAAGCTCCTCGGGAACTTTTGCAGTTGATGTCACCGCTGAATCCTTTACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGCTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCGTTCCTAATATGGGTGGAGAGGGTGGCTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCAGATCGAACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAACTTGTCCGCTATTACAAGCAGGCTGATTGTGAACTAGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTCGTTTTTGAGTGTATTCATCTGAACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAGCTTGACATATTATGGAATGCTAAAGACTACTTTCCTAAAAACTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCGTCTTCTGTTATTTCAATTGATCTGCCTCATGTTGAGGAGAAAGAAGGCCTAACCGTTGAAGCATTTGCTAAGGTCAAGGAAATTTTCAGCAATGTGGACTGGCTAGATTCAAAGGCAGAGGTAGCAAGTGTGCTCCAACAGATCACAGCATCAAATATCTTTCTTGAAAGACTGGACAGTGGGATTTCTGCTTCAACAAGTGGCTTGCAAAAGGAGTCATCTGGAAAATCTAAACTTGATTCGAAGGAACACAGTGACtcaaagaatctgacttcaacagttcaggagaaacattctacgtcctccttgggatcatcagttgatgttcctatggaaaataagacagaactattacaattaaaggcattgtcaggaaataacgttgagagtcttgaatgtttaggtcagggggaccaacctattccctcatttgggccctcaacagattcagattctactaaaaaggcacgaaatgattcaaagaatctgacttcaacagttcaggagaaagtttccacatcctccttgggatcatcagtggatgttcctatggaaaataagacagaatcattacaatcaaaggcattgtcaggaaataacattgagagtcttgaatgtataggtcaggggaaccaacctattccctcatttgggccctcaacagattcagattctattaaaaaggAGGTTGAATCATTAGAAACAAAACAATCATTAGAAAATGATACCAAGTTTACTGCATCTACGGCTCACGAGAATCGATCCATCcccttaagtgagccatcaatggatgcaaacttaataaaaaagaagagtggatcattagaatccaaggagaaagatattgagtcattagcatcaaaggcattggtggaaaacaataccaaggttcctacatccatggctcatggggagcagtctatgcccttaattgaaccatcaaaagatgcaaattcaatgaaacaaaagatggaacgattagattcaaaggaaaaggataccaaatcattagaatccaagtcattgttggaaaatgataccaactatcctccatctatggctcatgggaaacaatcttttcccttaattcaaccatcgactgatgcaaattcagtgaaaaagaTGGGACAATTAGAACAAATGGTATTGCCGGAAAATGATGTCAAGAGTGTCACATCCACAGTTCAGAGGAAACAATATGGTCCCTTACTTGAGCCACCTGTTGATGCAAACCTAATTAAAAAGAAGATTGAACCTCAAGAATTGCAGGTTGCACTTCAGCTTCCCACTCAATCTAAAATAATTTCACCACGGGTGCGTTCAGCTGTTCGATCTGCTTCAGCTTCTTTTTTTAACTCCTTGCAAGGTTCACCTGTAGCTATCTCAAGGTATCATAGTGCACCATCATCTCTTGGAATAACATCTGTGTTGCAGGATCATGCACCAATGGATATCAAAGAAGTCACTCATGCAGTGAAAGTATCTCCTCCGCCTTCTACTTTGCCTCCTTTAGACTCCAAGGTGCCAAATTCTTTAGAGCCTAGTTCTACAATTGTTCCTCCAACATCATCACCACCATTGCTTCCATCTTTACCATTAAAAACTTCAGTTGATGCTCTTACTGCCATGGAAAAGACTTTTGGATCCATTGCTCCTGCAGCTGTCACTCCTCCTccaccaccaccaccaccaccaccaccaccaccaccTCCTCCTCAGAGCGAGCATACTTCAAAATTGATGCAATCTAATGCTACACAGTACCCTGAAAATGCAACGCATGATGAAGGTAAGAAATCATTGGTTAGTCCTCCTCCTCCTCCGCCCCTTTCAATGCCAGCTCCTCCAACCAAGTCTTTATCCCATCCTCCAGCCCCTTCCCTTCCTGGAACATCACTTTCCACTGCCAAAGATTCATTTAAAGGTCCTCCTCCACCACCGCCTCCACCTACACCTCCATCTTCAACTAATCAGGCTTCGTCATCCTCGATACCTCCTCCTCCTCCACTCTCTGGGTTTCCTTCTTCAGCCTCCCACCCTCTTTCTTCTTCATCGAGTATGAGCAAGTCTGTTGGTACGCCTGGCCCTCCTCCCCCACCTCCACCTCCTAGCCATTCTAGTTCTACTCCATCACCATTAGCGCCACCACCACCCCCTCCTCCAGCTTCTGCATCCCAGAATTCTTTGTCTAAGAACTCCGCAAATGTTCCACCTCCCCCACCTCCTCTTGCTGCCAATGGGTTGTCAAAACCTGCTGTTCCCGGACCACCTTCTGCTCCATTCGGTGCAAAGGGACGTGGCAGCCTGTTGCGTGCTAATCCAAAAGGTCAGTCTCAGACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACGAGGGCAATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGAGTTTGTTCTCTGCAGCTGCACCAAATTCTAATGATGGAAAAGGAGGAAAGATGACTCGCCGCTCCTCACTTAAAGTTGACAAAGTTCAATTGATTGAGCTCAGGCGGGCATATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGATCTGATGTGTGCTGTGCTTGCATTGGATGATTCAGTATTGGATGTTGATCAAGTTGAGAACCTCATAAAATTCTCTCCAACCAAAGAAGAGATGGAAATGCTGAAGAACTATAATGGGGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTGCCAAGAGTGGAAAACAAGCTAAGAGTTTTCGCTTTTAAGATGCAATTCTTAACCCAGGTTTCAGAGCTTAAAAGGGACTTGAATATTGTAAATGATGCATCTGAACAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCGGCTGTGGGGTTTCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCCAGAAACAACAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTTCTAGATTTCCACAAAGACCTAGGGAGTTTGGAGGCTGCAACCAAGATACAATTAAAATATTTGGCAGAGGAAATGCAAGCTGTTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAAAATTTCTGCCAGATTTTGAAGGAATTTCTTTCTTATGCTGAGGCTGAAGTGAGGTCTTTGGCTCAACTATATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTGTACTTTGGTGAAGATCCAGCACGTGTCCCATTTGAACAAGTTGTATCTACTCTCCTCAACTTTGTGAGAATGTTCATAAAAGCGCATGAAGAAAATTGCAAGCAGATTGAATTAGAAAAAAAGAGAGCAGATAAGGAAGCTGAAAGTGAGAAGTCGAAGCTAGCTGCTGCTAAAAAGGAGTCTGAACAGATGTTAGGGACCACCATAAAGAGTGGGAATATTAAATGA 4620 0.3504 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYRVYIGGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLVPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYYKQADCELVKIDIHCHVQGDVVFECIHLNSDLEHEEMMFRVMFNTAFIRSNILMLNRDELDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPHVEEKEGLTVEAFAKVKEIFSNVDWLDSKAEVASVLQQITASNIFLERLDSGISASTSGLQKESSGKSKLDSKEHSDSKNLTSTVQEKHSTSSLGSSVDVPMENKTELLQLKALSGNNVESLECLGQGDQPIPSFGPSTDSDSTKKARNDSKNLTSTVQEKVSTSSLGSSVDVPMENKTESLQSKALSGNNIESLECIGQGNQPIPSFGPSTDSDSIKKEVESLETKQSLENDTKFTASTAHENRSIPLSEPSMDANLIKKKSGSLESKEKDIESLASKALVENNTKVPTSMAHGEQSMPLIEPSKDANSMKQKMERLDSKEKDTKSLESKSLLENDTNYPPSMAHGKQSFPLIQPSTDANSVKKMGQLEQMVLPENDVKSVTSTVQRKQYGPLLEPPVDANLIKKKIEPQELQVALQLPTQSKIISPRVRSAVRSASASFFNSLQGSPVAISRYHSAPSSLGITSVLQDHAPMDIKEVTHAVKVSPPPSTLPPLDSKVPNSLEPSSTIVPPTSSPPLLPSLPLKTSVDALTAMEKTFGSIAPAAVTPPPPPPPPPPPPPPPPQSEHTSKLMQSNATQYPENATHDEGKKSLVSPPPPPPLSMPAPPTKSLSHPPAPSLPGTSLSTAKDSFKGPPPPPPPPTPPSSTNQASSSSIPPPPPLSGFPSSASHPLSSSSSMSKSVGTPGPPPPPPPPSHSSSTPSPLAPPPPPPPASASQNSLSKNSANVPPPPPPLAANGLSKPAVPGPPSAPFGAKGRGSLLRANPKGQSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELESLFSAAAPNSNDGKGGKMTRRSSLKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMCAVLALDDSVLDVDQVENLIKFSPTKEEMEMLKNYNGDKDNLGKCEQFFLELMKVPRVENKLRVFAFKMQFLTQVSELKRDLNIVNDASEQIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFHKDLGSLEAATKIQLKYLAEEMQAVSKGLEKVVQELTASENDGPVSENFCQILKEFLSYAEAEVRSLAQLYANVGRNADALALYFGEDPARVPFEQVVSTLLNFVRMFIKAHEENCKQIELEKKRADKEAESEKSKLAAAKKESEQMLGTTIKSGNIK 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02122 1539 Gene3D - 196 341 - -
Gma17g02122 1539 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Gma17g02122 1539 Pfam Formin Homology 2 Domain 1118 1489 IPR015425 -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 500 564 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 834 871 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 883 1125 - -
Gma17g02122 1539 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1057 1508 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 1075 1099 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 1505 1522 - -
Gma17g02122 1539 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1116 1515 IPR015425 -
Gma17g02122 1539 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 682 708 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 433 450 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 1016 1032 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 1505 1539 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 894 916 - -
Gma17g02122 1539 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Gma17g02122 1539 Coils Coil 661 681 - -
Gma17g02122 1539 SMART PTEN_C2_2 197 337 IPR014020 -
Gma17g02122 1539 Gene3D Formin, FH2 domain 1135 1528 IPR042201 -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 580 601 - -
Gma17g02122 1539 Coils Coil 1490 1524 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 565 579 - -
Gma17g02122 1539 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 629 643 - -
Gma17g02122 1539 SMART it6_source 832 1535 IPR015425 -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 917 932 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 416 432 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 659 681 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 981 996 - -
Gma17g02122 1539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 474 708 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 1033 1065 - -
Gma17g02122 1539 PANTHER FORMIN-J 1001 1532 - -
Gma17g02122 1539 PANTHER FORMIN-J 1 603 - -
Gma17g02122 1539 PANTHER FORMIN-J 630 1003 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 612 627 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 406 451 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 942 964 - -
Gma17g02122 1539 MobiDBLite consensus disorder prediction 965 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02122 Gma-Chr17 38726931 38740718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02122 750 906 FH2 protein (formin) Gene Family AT2G25050 37.342 9.50e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02122 - - gsj:114393863 2719.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02122 17 38726931 38740718 Gma17g02122 17 38726931 38740718 ECH
Gma17g02122 17 38726931 38740718 Gma14g00940 14 10657616 10680802 GST