Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02121 ATGTGGCACAAAACTAAGACCCTACTTGGCTACCTTTCTTTTCATATAAAGAAATTGTGCTTGATGGTCGTTCAACTCTTCAACACAGAAATCATAATGGATGAAAAGGTGGAAACTATTAAAGCTGAGTTAAAACGAGTGAGAGAGGAGAACAACACTCTAAGAATGATGCTTGAAGTTCTAAGCAGCAAGTACACAAAGCTTGAGACCCATCTTCAAGAAATAAACAAGACACAACACAAGGGCATGAGTTCAAATCAAATAGGGTCAGTAACAGTACCACCTATGTTTCAGACAAACAAGAGACCGAGACTAGAGTTTCCCACAGCAAAAAAGCCATTACAAATCTTTGTCAAAACACACCCCAAGGATGATAGTTTGATAGTAAAAGATGGCTATCAATGGAGGAAGTATGGGCAGAAGGTCACCAAAGACAATGCTTCACCAAGGGCTTATTTCAGGTGCTACATGGCTCCCATTTGCCCAGCAAAAAAGAAGGTGCAAAGATGTTTACATGATAAGTCAATCCTTGTTGCAATTTATGATGGAGAGCACAGCCATGGACCCCTTGATGAGTCCTCTTCGTCCACACCTAAAGGCTCATCACCAGTGGCTAATAATAAGTTACCTCTGATGACAAGCGTACCAAATGACAAAGAAGCCATGAACATTGACTTGGCTCTTTCAGGGTGGTCTCAAACAGATAGAAGACATTGTGAAGATGTCATGCAACAGAATAATAACAATGGTGGTAGCAACATCAAAATTGAAGAATATGTAAGTTCTCTAATCAAGGATCCAGACTTCACCATGTCATTAGCTGAAGCAGTTGCCCGCACCATCACTGGCCAGCAGAAGCAACAAGATCTAAACCTCAATTTGGAGCTTCCTGAAGAGTGA 900 0.41 MWHKTKTLLGYLSFHIKKLCLMVVQLFNTEIIMDEKVETIKAELKRVREENNTLRMMLEVLSSKYTKLETHLQEINKTQHKGMSSNQIGSVTVPPMFQTNKRPRLEFPTAKKPLQIFVKTHPKDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCYMAPICPAKKKVQRCLHDKSILVAIYDGEHSHGPLDESSSSTPKGSSPVANNKLPLMTSVPNDKEAMNIDLALSGWSQTDRRHCEDVMQQNNNNGGSNIKIEEYVSSLIKDPDFTMSLAEAVARTITGQQKQQDLNLNLELPEE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02121 299 Coils Coil 37 78 - -
Gma17g02121 299 MobiDBLite consensus disorder prediction 190 208 - -
Gma17g02121 299 MobiDBLite consensus disorder prediction 187 208 - -
Gma17g02121 299 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02121 299 ProSiteProfiles WRKY domain profile. 124 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02121 299 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g02121 299 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 33 281 IPR044810 GO:0003700
Gma17g02121 299 SMART WRKY_cls 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g02121 299 Gene3D WRKY domain 115 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g02121 299 PANTHER WRKY TRANSCRIPTION FACTOR 49 33 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02121 Gma-Chr17 38721498 38725532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02121 43 289 WRKY Transcription Factor Family AT1G80840 35.125 1.56e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g02121 WRKY 5.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02121 - - gmx:100170679 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02121 17 38721498 38725532 Gma14g00941 14 10682164 10684359 GST
Gma17g02121 17 38721498 38725532 Gma04g00569 04 5085846 5087515 PCT
Gma17g02121 17 38721498 38725532 Gma06g00555 06 4902892 4904680 PCT
Gma04g00569 04 5085846 5087515 Gma17g02121 17 38721498 38725532 PCT
Gma06g00555 06 4902892 4904680 Gma17g02121 17 38721498 38725532 PCT