Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02092 ATGATGCACATGACCCTTTACTGGGGCAAGAAGGTGACGATCTTGATCGATTCATGGAAGACCGATTCCTGGACGAGTTACGTCCTGAGTCTACTCGCCTGCCTCGTCGTTGCCGCGTTCTATCAGTACCTCGAGAATCGCCGGATTCGCCTGAAGCTCCTCGCCGGCGACCGGAGGCCCTTGCCGGCGCCGGAGATCCGCACCCCTCTTCTCCGGTGGGGCGTCGCCGGCGGCGACAATGCCAGGTTGGGCGTCAAGTTCGCGGAAGCGGTTCTGTTCGGGGTGAACTCTGCGATCGGGTACTTGTTGATGTTGGCGATCATGTCCTTCAATGGAGGGGTGTTTTTAGCAATTGTGGTGGGTCTCACCATTGGTTATTTTTTCTTCAGGAATGAGGGGGAGGATGATGCGCTTGTTGTTGATAATAATTCTTGCGCATGTGCTTAG 447 0.5548 MMHMTLYWGKKVTILIDSWKTDSWTSYVLSLLACLVVAAFYQYLENRRIRLKLLAGDRRPLPAPEIRTPLLRWGVAGGDNARLGVKFAEAVLFGVNSAIGYLLMLAIMSFNGGVFLAIVVGLTIGYFFFRNEGEDDALVVDNNSCACA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02092 148 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 148 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gma17g02092 148 Pfam Ctr copper transporter family 4 129 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gma17g02092 148 PANTHER CTR FAMILY COPPER TRANSPORTER 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02092 Gma-Chr17 38261397 38262211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02092 1 148 Inorganic Solute Cotransporters AT5G20650 55.921 5.36e-54 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02092 K14686 - gmx:100795071 292.737