Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02091 ATGCTTACCATTGTCGCCATCCACTCCCAACTTCGCTACCTCTGCCTTTTCATCCACATGTACGAGGTTTGCATTCTCATGAACCCTTTCTTCGCCAAAGATATCAAGGACTCCGGTGTCGACATCTTCCACATTCGTGAGCATCCACATTCAAGAGTTCTAGAAGTCAAGGAATCTCCCCACAATTTTTCTTCTAAGGTTAAGTGTTCCTTGGAGGAATCAGAGAAACAGGTTTTGAAACAAGGTTCTTTCCAGAGGTTATGTCTATCAGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAAGACATTTCAATTTCATTTGCTGGCTCAAAGCTCTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACAAACAGTTTCTCATGGAGTAACATGCTAGGTGAAGGAGGGTTTGGACCTGTCTACAAGGGTTTTGTTGATGACAAACTTAGGTCTGGTTTGAAGGCTCAGACTGTAGCTGTGAAAAGGTTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAACTAAGGCATCCACATCTTGTCAAGTTAATTGGGTACTGTTATGAGGATGAACATAGGCTTTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCCGAAGATACTCTGCTGCCATGCCATGGTCAACCAGGATGAAAATTGCATTAGGAGCAGCCAAAGGTCTTGCCTTCCTTCATGAAGCAGATAAGCCTGTAATATACCGCGATTTCAAAGCTTCGAACATTTTACTAGACTCGGATTTCACAGCTAAGCTCTCAGATTTTGGGCTAGCTAAGGATGGCCCTGAAGGGGAAGACACACATGTAACAACACGCATAATGGGAACACAAGGTTATGCTGCTCCTGAGTACATCATGACAGGTCACCTTACAACCAAGAGTGATGTGTATAGCTATGGGGTGGTGCTGTTGGAATTGCTGACAGGAAGACGAGTAGTGGATAAATCTCGGTCGAATGAAGGCAAGAGCTTGGTGGAATGGGCAAGGCCTTTGTTGAGAGATCAGAAAAAGGTGTACAATATCATAGATCGTAGACTAGAGGGGCAATTTCCCATGAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTGAGTCATCACCCAAATGCAAGGCCAACTATGAGTGATGTGATTAAGGTATTGGAGCCACTTCAGGACTATGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCAAAGTATGTGGTGCAGGCCGGGACCGATCCATTAGTGCATGGAATCAAAGAATATCTCACAAGGTTCTGACGAGAAACGAAGTTGGAAGACGATTCTCAACTGATAATCAAGAGAGTGACTACTGGTCGGCGACAGCGAACTACTTCCGTGTAATGGCGACCTCCGTCGCAGTCGCCGGCGCTTTGACGGCGCATGATCGCCGGATTCTGACAGCGGTGAACGTCGGAGCGTCGAGCCTGTCGTTGGCCGGTTCCAGCTTCATTGTAGTGTGCTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTCTTCTACCTCGCTCTCTCTGATATGCTTTGCAGTTTCTTCGGCATAATAGGGGACCCGTCCAAAGGTTTCTTTTGTTATGCTCAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTTCTATGGACTACAACAATTGCTTTTACCCTTCACCGCACTGTTGTAAAACATAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTCTGGGGTACTTCCCTGGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAAACATTTTGGTGCATGGTGTTGGACACAAACAGGTCGCACAGGGAAGGCAGTTCATTTTGTAACATTTTACATGCCACTCTGGGGTGCAATTCTGTATAATGGATTTACATACTTACAAGTAATACGCATGCTGAATAATGCAACCCGTATGGCGGTTGGTATGTCAGGCCAAACTTTTGTGTCAGATACAAGAGATAACATGAGGGCTTTGAATCGCTGGGGATACTATCCACTAATTCTGATAGGATCATGGACTTTTGGCACCATTAACCGTATTCATGATTTTTTTGAACCCAACCATAAGATCTTTTGGCTCACATTTCTTGATGTTGGAACGGCTGCTCTTATGGGCCTCTTTAACTCAATTGCTTATGGTCTCAATTCTTCTGTTCGTAGAGCAATTTGTGAAAGACTGGACAAGTTCTGGCCTGAGAGATTAAACAGATGGCTCCCTAACAGTTTAAAGTACAAGAACCTACAGCAAGAAAGTGAACTAGTTTTGTTCAAAACTGAAGATCAATAA 2379 0.443 MLTIVAIHSQLRYLCLFIHMYEVCILMNPFFAKDIKDSGVDIFHIREHPHSRVLEVKESPHNFSSKVKCSLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDISISFAGSKLYAFTLEELREATNSFSWSNMLGEGGFGPVYKGFVDDKLRSGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSRSNEGKSLVEWARPLLRDQKKVYNIIDRRLEGQFPMKGAMKVAMLAFKCLSHHPNARPTMSDVIKVLEPLQDYDDVFIGPFVYVAKVCGAGRDRSISAWNQRISHKVLTRNEVGRRFSTDNQESDYWSATANYFRVMATSVAVAGALTAHDRRILTAVNVGASSLSLAGSSFIVVCYLLFKELRKFSFKLVFYLALSDMLCSFFGIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAVHFVTFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGMSGQTFVSDTRDNMRALNRWGYYPLILIGSWTFGTINRIHDFFEPNHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLNRWLPNSLKYKNLQQESELVLFKTEDQ 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02091 792 CDD STKc_IRAK 134 408 - -
Gma17g02091 792 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 493 747 IPR017981 GO:0004888|GO:0007166|GO:0016021
Gma17g02091 792 Gene3D Phosphorylase Kinase; domain 1 89 210 - -
Gma17g02091 792 Pfam Protein tyrosine and serine/threonine kinase 130 404 IPR001245 GO:0004672|GO:0006468
Gma17g02091 792 Gene3D - 485 769 - -
Gma17g02091 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 594 609 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 737 753 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 571 589 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 646 669 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 633 645 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 689 710 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 556 569 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 510 524 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 526 548 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 493 508 IPR022340 -
Gma17g02091 792 PRINTS Putative plant GPCR, GCR1, signature 719 736 IPR022340 -
Gma17g02091 792 PANTHER OS01G0588500 PROTEIN-RELATED 68 424 - -
Gma17g02091 792 Gene3D Transferase(Phosphotransferase) domain 1 211 415 - -
Gma17g02091 792 SUPERFAMILY Protein kinase-like (PK-like) 104 407 IPR011009 -
Gma17g02091 792 PRINTS GCR1-cAMP receptor family signature 554 572 IPR022343 -
Gma17g02091 792 PRINTS GCR1-cAMP receptor family signature 695 713 IPR022343 -
Gma17g02091 792 PRINTS GCR1-cAMP receptor family signature 523 538 IPR022343 -
Gma17g02091 792 PRINTS GCR1-cAMP receptor family signature 727 746 IPR022343 -
Gma17g02091 792 PRINTS GCR1-cAMP receptor family signature 504 522 IPR022343 -
Gma17g02091 792 ProSiteProfiles Protein kinase domain profile. 128 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02091 792 Pfam Slime mold cyclic AMP receptor 491 746 - -
Gma17g02091 792 PANTHER KINASE 1B 68 424 - -
Gma17g02091 792 SUPERFAMILY Family A G protein-coupled receptor-like 490 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02091 Gma-Chr17 38240133 38260340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02091 116 405 Glycoside Hydrolase AT3G07070 52.560 3.56e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma17g02091 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02091 - K22987 gmx:100802636 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02091 17 38240133 38260340 Gma17g02091 17 38240133 38260340 ECH
Gma14g00992 14 11808614 11811081 Gma17g02091 17 38240133 38260340 ECH
Gma09g00640 09 7260471 7264012 Gma17g02091 17 38240133 38260340 ECH
Gma07g00373 07 3334683 3336610 Gma17g02091 17 38240133 38260340 ECH
Gma17g02091 17 38240133 38260340 Gma14g00991 14 11787246 11799055 GST