Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02090 ATGTCTTCCCATGGTGGGACCACCACAACGCCACCACCCTTAAATGTCACCATGGTGGCTGTGGATAAAGACAAGAACAGTGGCTATGCCTTCCGTTGGACAATTAAACACATTGATAACCCAGTCATCATTGCAGTCCATGTCAAGCACAAAAACATTCCTCATCATGAGGGCACCAACGTTTTTCCTCCCGACGAAGACGATATAGCACATGTTTTCAAACCCCTACGTCACATGTGTCATGGCAACATCGTTATGTTGAAAGAAGCCGTAATCGATGATAGTGATGTTGTCAAAGGAATTGTGGAATATGCACAGAGAAATCGCGTCAATACTATAGTCGTTGGTGCAACTCACTCGTGTAAGAGTACTTTGGCACGAACTCTGAACCTGAGGAGTGGAAGCAAaaaatGTAAAGGCCATCACGATGTGTCAACAGGCGTGATGAAATCAGCACCAGATTATAGTTCAGTGTACGTAATTTCAAAAGGGAAGATAGTGGGAGCTCGACCAGCAATACGCCCAATGATAAACGTGGTTGCGCCACCAAAAGAAAATGTAGTAAGGACACATTCACATAGAAGAGGGAGCACCAATGGAAGATCAGAAAGATCAACTCTACTTGAAATGCCAAGGTGTTCTTCAGCTGGTCAGTCAACGAATCAGAGGTCACTATTTAGCCCCAGCTCGGTTGAAAGTGATTCTCCATCAGATTCCTTAGTATTTAATATGGTAAATTTAAGTGGTAAATTTTTTTGGCTATGGAATATTTACTGTTTTACTTCATTCCAGGGAGATTTGGAAGCTGCGATGAAAATGTTGAGGCTCAAATTGAAGCAAACTATGGACATGTACAGCTCAGCCCAAAACAAGGCTAAGGAGATTAACCAATGGAAGGAGGAACGTATATCTGAGGAAGCTACTAAGTTGCCTAAAGAGGCAGCTCTAGAACCGGTAGAAATGGAGAAAGTTAAAGCTCAAGCTGCCTTGGAAGCAGCTGAGGAAGCCATTAAGATGGTTGAAAAGGAAGCACAAAAAAGATTTCAGTTAGAGGTCAAGGCTAGGAGAGAGGCACAAGAGAAGGATAGAACATTAAATCGGTTGATCAACAACGATACTAGGTACAGAAAATACAGCATAAAGGATATTGAAGAGGCTACTCAAAAGTTCTCTCCATCATTGAAAGTAGGTGAAGGTGGATATGGACCTGTGTTTAGAGGCCAACTTGATCACACTCCGGTTGCAATCAAAATTTTAAACCCTGAAGCTTCGCATGGAAGGAGGCAGTTCCAACAAGAGGTTGAGATATTATGCAGCATAAGGCATCCTAACATGGTCCTCCTCCTTGGTGCGTGTCCTGAGTACGGATGCTTAGTGTATGAGTACTTGGAGAATGGCAGCTTAGAAGATAGATTGTTGATGAAAAATAATAGCCCTCCAATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAAATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCAATTGTGCACCGGGACCTTAAACCCTCCAACATTCTGTTGGACAAGAACTTTGTGAGCAAAATAAGTGATGTAGGCCTTGCAAGATTAGTTCCACCTTCTGTGGCTGATTCTGTCACACAATATCACTTGACTGCAGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTACCAACAAACAGGAAGGTTAACAAAAAAATCAGACATTTATTCCTTGGGGATAATGCTACTACAAATCATCACAGCCAAGCCTCCAATGGGGCTTGCACACCACGTTAAGAGGGCAATTGAGAAGGAAACATTCTCAGAAATGCTTGATATTATGATCAGTGATGTGCCACTGGAAGAGGCTCTAGCATTTGCCAAACTCTCATTGAGTTGTGCAGAGCTCAGCAAAAAGGACAGGCCTGATCTTGCAACAGTTGTGGTGCCGGAGCTTAACCGTTTAAGGGACTTTGGATTGACATTTCAGAAAAATTAG 2001 0.4283 MSSHGGTTTTPPPLNVTMVAVDKDKNSGYAFRWTIKHIDNPVIIAVHVKHKNIPHHEGTNVFPPDEDDIAHVFKPLRHMCHGNIVMLKEAVIDDSDVVKGIVEYAQRNRVNTIVVGATHSCKSTLARTLNLRSGSKKCKGHHDVSTGVMKSAPDYSSVYVISKGKIVGARPAIRPMINVVAPPKENVVRTHSHRRGSTNGRSERSTLLEMPRCSSAGQSTNQRSLFSPSSVESDSPSDSLVFNMVNLSGKFFWLWNIYCFTSFQGDLEAAMKMLRLKLKQTMDMYSSAQNKAKEINQWKEERISEEATKLPKEAALEPVEMEKVKAQAALEAAEEAIKMVEKEAQKRFQLEVKARREAQEKDRTLNRLINNDTRYRKYSIKDIEEATQKFSPSLKVGEGGYGPVFRGQLDHTPVAIKILNPEASHGRRQFQQEVEILCSIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLLMKNNSPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPSNILLDKNFVSKISDVGLARLVPPSVADSVTQYHLTAAAGTFCYIDPEYQQTGRLTKKSDIYSLGIMLLQIITAKPPMGLAHHVKRAIEKETFSEMLDIMISDVPLEEALAFAKLSLSCAELSKKDRPDLATVVVPELNRLRDFGLTFQKN 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02090 666 Coils Coil 351 371 - -
Gma17g02090 666 Gene3D HUPs 7 151 IPR014729 -
Gma17g02090 666 MobiDBLite consensus disorder prediction 201 236 - -
Gma17g02090 666 ProSiteProfiles Protein kinase domain profile. 390 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02090 666 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 151 - -
Gma17g02090 666 MobiDBLite consensus disorder prediction 187 236 - -
Gma17g02090 666 CDD STK_N 16 164 - -
Gma17g02090 666 SMART serkin_6 390 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02090 666 Gene3D Phosphorylase Kinase; domain 1 368 462 - -
Gma17g02090 666 Pfam Universal stress protein family 18 139 IPR006016 -
Gma17g02090 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Gma17g02090 666 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 8 665 - -
Gma17g02090 666 Pfam Protein tyrosine and serine/threonine kinase 395 649 IPR001245 GO:0004672|GO:0006468
Gma17g02090 666 Coils Coil 316 343 - -
Gma17g02090 666 Gene3D Transferase(Phosphotransferase) domain 1 463 660 - -
Gma17g02090 666 SUPERFAMILY Protein kinase-like (PK-like) 370 649 IPR011009 -
Gma17g02090 666 PANTHER OS02G0152300 PROTEIN 8 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02090 Gma-Chr17 38205906 38211945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02090 87 660 Receptor kinase-like Gene Family AT5G12000 55.592 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma17g02090 PK_Tyr_Ser-Thr 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02090 - - gmx:100786386 1123.61