Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02086 ATGGAGGAGATGTCCTTTGCGGTTGCAGTGCCATTAAGAGTAGGTAATTGTAATTGCAATTCAGTCTGTGATAACCCAACCACAGTAGTTCCCCACATGGATGTATCCAGATTTAAGCTGATGGGGGATACAGGGTTGTTATCTAATTCTGTAACTAAGATTTTCACCGAAACGGTCGCAGGTTCAGATGATTGTCATGATAGTGGCAATTTGGAGGATGAAGTTGGTATTGCGGAAGTCATACCACCAATTCAAGATAGGGAAGGAGAGAGTCCTATGTTGGATATGATATCACAAAATAGAAGCACTTTGGTTGCTGGTGATGAAGAGTTAACCATGGAAATTGAGGAGGATTCGTTGTCGTTTGAAGGTGACCAGTTTGTTGATAGCTCGTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCATTCTGTTTTGATGCTACTTCAGATGTTGGGACACCGTGTTCCACAGATGTAGAGAAGAGCATCTGTGCTGTCAATATTGTTGCCGAGGCTGTTGATTTAGGGGAGTCAAATGTCGACACTGATATTATGACTGATCCTCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGTCTGGAGTTAGATCTGGTCCAAAGTCTTCTGCTGTTGATCTTCATCAGTTGCCTCAGGAAAAAGGGGTGAGTGGAACAGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTTTGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTGTACCTCGGTTTCTGAAAATTCCTATTCAAATGCTAATTGGTGATCGGGTAATTGATGGAATAAACAAGTGTTTTAATCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTTGCAAACTATTGTCGTGATCGTACCCATTGGGCCTTGGCTGAGGAAATAGAATTTGTGAAGGAAGGTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAAATCAGTGGAAAAAGGTTTTCACCAATTGTTTCTTAAAGGTCGATGCTGAAGTTGGTGGGAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCTGTTATTTGTGCTTCTCATATCATAGTTGCAAATTGTGGTGATTCACGAGCAGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATTCAATGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATTGGCGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACGTTCGTTCCCCGTACAAAAGACGATGAGTGTCTCATTCTGGCCAGCGATGGTCTGTGGGATGTTATGACAAACGAGGAGGTGTGTGACCTCGCTCGGAAACGAATAATTCTCTGGTACAAGAAAAATGGCTTGGAACAACCCTCTTCAGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCAGCAGAATACCTATCAAACCGCGCCCTTCAGAAAGGAAGCAAAGATAACATCAGTGTGATTGTGGTTGATTTGAAACCTCAAAGAAAATATAAGAGCAAGACATGA 1677 0.4305 MEEMSFAVAVPLRVGNCNCNSVCDNPTTVVPHMDVSRFKLMGDTGLLSNSVTKIFTETVAGSDDCHDSGNLEDEVGIAEVIPPIQDREGESPMLDMISQNRSTLVAGDEELTMEIEEDSLSFEGDQFVDSSCSLSVVSENSSVCGEESFCFDATSDVGTPCSTDVEKSICAVNIVAEAVDLGESNVDTDIMTDPLAVAVSLEEESGVRSGPKSSAVDLHQLPQEKGVSGTVGRSVFELDYTPLYGFISLCGRRPEMEDAVATVPRFLKIPIQMLIGDRVIDGINKCFNQQMTHFFGVYDGHGGSQVANYCRDRTHWALAEEIEFVKEGLISGSMKDGCQNQWKKVFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAVICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFVPRTKDDECLILASDGLWDVMTNEEVCDLARKRIILWYKKNGLEQPSSERGEGIDPAAQAAAEYLSNRALQKGSKDNISVIVVDLKPQRKYKSKT 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02086 558 CDD PP2Cc 244 548 IPR001932 -
Gma17g02086 558 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 108 558 - -
Gma17g02086 558 Pfam Protein phosphatase 2C 282 541 IPR001932 -
Gma17g02086 558 Gene3D - 230 558 IPR036457 -
Gma17g02086 558 ProSiteProfiles PPM-type phosphatase domain profile. 243 548 IPR001932 -
Gma17g02086 558 ProSitePatterns PPM-type phosphatase domain signature. 294 302 IPR000222 GO:0043169
Gma17g02086 558 SMART PP2C_4 231 546 IPR001932 -
Gma17g02086 558 PANTHER ALPHABET, ISOFORM E-RELATED 108 558 - -
Gma17g02086 558 SUPERFAMILY PP2C-like 236 550 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02086 Gma-Chr17 38150243 38153835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02086 140 558 PP2C-type Phosphatase Gene Family AT1G17550 54.651 1.89e-159 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02086 K14497 - gmx:100805281 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02086 17 38150243 38153835 Gma14g01015 14 12360510 12364454 GST