Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02079 ATGGCTGGCAGTGGCACCTTTGCAGAGATCATAGATGGTGATGTGTTCAAGTACTATGCACAAGGCCATTGGAACAAGTCCTCTTCTGGAAAATTCGTTCCCATCATCAATCCAACCACTAGGAAGACCCACTTCAAGGTCCAAGCTTGTACACAGAAAGAGGTTAATAGGGTCATGGAATCAGCAAAAACAGCTCAAAAATCATGGGCCAAGACTCCACTGTGGAAAAGAGCAGAGTTGCTTCACAAGGCTGCAGCAATACTGAAGGAGCACAAAGCACCTATTGCTGAGTGTCTTGTAAAGGAGATTGCAAAGCCAGCTAAGGATGCTGTCACTGAGGTGATCAGATCAGGGGATTTGGTGTCATATTGTGCTGAGGAAGGGGTGAGAATTCTTGGGGAAGGAAAATTTCTGGTCTCTGATAGTTTTCCGGGCAATGAAAGAACCAAATACTGTCTCACTTCCAAGATTCCACTGGGAGTTGTTTTAGCCATTCCACCTTTCAACTATCCTGTTAATCTGGCTGTTTCAAAGATTGCTCCAGCGCTTATTGCTGGAAACTCCATTGTTCTTAAACCCCCCACCCAGGGTGCTGTTGCTGCACTACATATGGTGCATTGCTTTCATTTGGCTGGTTTCCCCGAAGGCCTTATTAGCTGTGTGACAGGAAAGGGTTCCGAGATTGGTGATTTTCTTACAATGCATCCGGGGGTGAACTGCATAAGTTTCACTGGTGGGGACACTGGAATAGCAATATCAAAGAAGGCCGGCATGGTTCCTCTTCAAATGGAATTGGGTGGAAAAGATGCCTGCATTGTTCTTGAAGATGCTGACTTGGATTTGGCAGCTGCTAACATTGTAAAAGGAGGCTTTTCCTACAGTGGTCAAAGATGCACAGCTGTAAAGGTTGCTCTGGTCATGGAATCGGTTGCCAACACTCTTGTAAAGAGAATCAATGATAAAATTGCAAAGTTAACTGTTGGACCTCCTGAGATTGACAGTGATGTCACACCAGTTGTCACCGAATCCTCCGCTAACTTCATTGAAGGGTTGGTAATGGATGCTAAGGAGAAAGGAGCAACATTCTGCCAGGAATACGTAAGGGAGGGAAATCTCATTTGGCCATTGCTGTTGGATAATGTTCGTCCCGATATGAGGATAGCATGGGAGGAGCCATTTGGACCAGTTTTGCCAGTTATCAGGATAAATTCTGTTGAAGAAGGAATCCACCATTGTAATGCTAGCAATTTTGGCCTTCAGGGATGTGTCTTCACAAGAGACATTAACAAAGCAATGCTGATCAGTGATGCAATGGAGACAGGAACAGTTCAAATTAATTCAGCACCAGCTCGTGGACCTGATCACTTTCCTTTTCAGGGTCTGAAGGATAGTGGAATTGGTTCTCAAGGGATCACCAACAGTATTAACATGATGACAAAGGTTAAGACTACAATAATCAACTTGCCAGCACCTTCTTACACTATGGGATGA 1491 0.446 MAGSGTFAEIIDGDVFKYYAQGHWNKSSSGKFVPIINPTTRKTHFKVQACTQKEVNRVMESAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPEGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVANTLVKRINDKIAKLTVGPPEIDSDVTPVVTESSANFIEGLVMDAKEKGATFCQEYVREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAMLISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKTTIINLPAPSYTMG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02079 496 PANTHER ALDEHYDE DEHYDROGENASE 1 496 - -
Gma17g02079 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Gma17g02079 496 CDD ALDH_F11_NP-GAPDH 15 487 - -
Gma17g02079 496 SUPERFAMILY ALDH-like 16 487 IPR016161 GO:0016491
Gma17g02079 496 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 496 - -
Gma17g02079 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Gma17g02079 496 Pfam Aldehyde dehydrogenase family 24 483 IPR015590 GO:0016491
Gma17g02079 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 483 IPR016162 GO:0016491
Gma17g02079 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 457 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02079 Gma-Chr17 37999075 38004127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02079 1 496 Aldehyde Dehydrogenase Gene Family AT2G24270 86.895 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02079 K00131 - gmx:100789108 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02079 17 37999075 38004127 Gma14g01025 14 12519844 12528401 GST