Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02074 ATGAACCAGAACCCGCAATCAAGTGATGGAAGGAACGATGAAGATTCTATTCTATCTGATTTCCTCGCTTCTTTAATGAATTATACTTCCACTCAAGCAGCACTCGTGCTCAATGCATCCAGGCGTTTTAGATATACTTTGGACTTGAGAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCCGGTGAACGTGAGCTAGTGATAAGTACAGCAGTGTCACCCCCAACTCCAGTTGGTGACTATGATATTGGGCTCGAACAACTTGTTTCAATGTCTACGGATCAGAATATTTCTGCTTTACATCAATATGGAGGGGCAAGTCTTCAACATGTTGTTTGGTTGCTTATAGAAATGTTGAAGTGA 414 0.4155 MNQNPQSSDGRNDEDSILSDFLASLMNYTSTQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVSPPTPVGDYDIGLEQLVSMSTDQNISALHQYGGASLQHVVWLLIEMLK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02074 137 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 54 IPR024750 GO:0005516
Gma17g02074 137 PANTHER CATION TRANSPORTING ATPASE 20 123 - -
Gma17g02074 137 Gene3D - 30 76 - -
Gma17g02074 137 PANTHER CALCIUM-TRANSPORTING ATPASE 20 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02074 Gma-Chr17 37871555 37873485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02074 32 122 Primary Pumps ATPases AT3G21180 62.637 3.98e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02074 K01537 - gmx:102662984 206.838