Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02072 ATGGCTGCACCACATGATAATGATCCAAGAAACATTGTTTCCATTTCAAGGATTGTGTCTGTGCATCCAAAGCTTGTGCAACCTCAGAGGGTTTTGACCCTTTCAAATTTGGATAGACAGTGTCCAAATCTCATGCACTTGGTGTTCTTTTACAATAACCTTCCTCACCAAACTCTGAAGGACTTGTCCCTCAATTCAGTGTTCTCCAACTTGAAATCTGGCTTGGAAGAGACCTTGACTCTGTGGTATCCTAGTGCAGGTAGGCTTGGGACAAATCAAAGTGATGGCAAGCTCAATTTGTGGTGCAACAACCAGGGTGCAGTTCTGGCAGAGGCTGAAACCTGTGTTAAAATATCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAGAAGCTGGTTTATAAGCCAGATTTTGATAAGAATTTCTCAAACATGCCTCTGATTGTTGCTCAGGTTACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCATTATTTGACGGGCCAGCAACCTATGACTTCTTGTATGCATGGGCCTCAAATTCTGAAATTGTGAAAGGAAGAAGCAGATCTGATGATGAGCTTCCAAAACCAGTGCATGAGAGAGGGATAATTCTGAGTGGTAGTCTTCAAGCCACAAGAGGGACTATAAATTTTCCTTCAGATTCAAGTTCAAATGTTAAGCAAGTTAGGGCCATGGCAATAGATCACTTATATCAACTTATAATGCAAACAGCTAGTGGACAAAATGGCTTCCCTATGCAAATTGGAGGACCCTCTAATCCAAAGAAGTGTGTTCTTAAAACCTATCATCTTTCAGGTGATATGATTGAAGACTTGAAAAGGAAACACTTTCCCATGCAAAGAGGTTCACTTCCTTTCTCAACCTTTGAGGTTCTTGCGGCTCACCTTTGGAAGGCAAGGACCAAAGCATTAGGGGTGAAGAAAGAGAAGCTAGTATGTTTCCAATTCGCGGTGGACATAAGGAACAAGATGACACCTCCATTGCCAAAATCCTTCAGTGGAAACGCTTATGTTCTCGCCTCCATTATGATGTCAGTGGCAGAATTGGAACAAACAAGCCATGAATTCATCGTTGATAAAATAAGAGAAGCCAAAAACAGTGTAAACCATAACTATGTGAAAGCCTACGTTGGTGCCCTAGATGGACCACAACAAGGTTCTTCACTCCCTCCACTCAAGGAGCTAACTTTGGTCTCTGATTGGACAAGAATGCCCTTTCACAACATTGAGTTCTTTCGTGGAAAAGCAACCTATGCATCCCCTTTGGCCACTCCTATGCCACAGGTTGCATATTTCATGCAAAGCCCTAGTGACCACAAGGGCGTTGACGTGAGGATTGGCTTTGAAGCGGAAAACATAAGTGCTTTTAGTGAATGCTTTTTGAGCATGGCGTGA 1440 0.4243 MAAPHDNDPRNIVSISRIVSVHPKLVQPQRVLTLSNLDRQCPNLMHLVFFYNNLPHQTLKDLSLNSVFSNLKSGLEETLTLWYPSAGRLGTNQSDGKLNLWCNNQGAVLAEAETCVKISQLGNLSEYNEFFEKLVYKPDFDKNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIVKGRSRSDDELPKPVHERGIILSGSLQATRGTINFPSDSSSNVKQVRAMAIDHLYQLIMQTASGQNGFPMQIGGPSNPKKCVLKTYHLSGDMIEDLKRKHFPMQRGSLPFSTFEVLAAHLWKARTKALGVKKEKLVCFQFAVDIRNKMTPPLPKSFSGNAYVLASIMMSVAELEQTSHEFIVDKIREAKNSVNHNYVKAYVGALDGPQQGSSLPPLKELTLVSDWTRMPFHNIEFFRGKATYASPLATPMPQVAYFMQSPSDHKGVDVRIGFEAENISAFSECFLSMA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02072 479 Gene3D - 11 221 IPR023213 -
Gma17g02072 479 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 10 478 - -
Gma17g02072 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 478 - -
Gma17g02072 479 Pfam Transferase family 20 474 - -
Gma17g02072 479 Gene3D - 252 477 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02072 Gma-Chr17 37780203 37786101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02072 13 476 Monolignol Biosynthesis Gene Families AT5G48930 23.418 2.92e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02072 K15400 - gmx:100779295 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02072 17 37780203 37786101 Gma14g01035 14 12906645 12912018 GST