Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02067 ATGGAAACTGGAAACGACAAATTTATGCTGGTGGTTGATGATGTCAGTGATGAATTATGGTCTAGTCAACTGGTTGACACCCTAAAATTAAACCAAAACCACAATGAATTTGGCTCATATCAAGACTATGTGAATGGCTTCCCATGGCCACCAAGATCATACACTTACAGCTTCTGCAGAAAGGAGTTTAAGTCTGCTCAGGCACTTGGTGGACACATGAATGTTCATAGGAGGGATAGGCCAAGGTTGAGGCAGTCATCACCCCTAATTCATGAAGTTCAAGGTCAAGCTGCTGGCCCTATAAGGCTCAACCTTAATCTTGATCCTAACAATAACTCAGCCTCATCTTGA 351 0.4274 METGNDKFMLVVDDVSDELWSSQLVDTLKLNQNHNEFGSYQDYVNGFPWPPRSYTYSFCRKEFKSAQALGGHMNVHRRDRPRLRQSSPLIHEVQGQAAGPIRLNLNLDPNNNSASS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02067 116 Pfam C2H2-type zinc finger 59 78 - -
Gma17g02067 116 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Gma17g02067 116 PANTHER OS07G0101800 PROTEIN 31 116 - -
Gma17g02067 116 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
Gma17g02067 116 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 31 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02067 Gma-Chr17 37684766 37689651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02067 41 84 C2H2 Transcription Factor Family AT3G23130 79.545 1.21e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02067 - - gmx:100781722 155.992