Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02061 ATGGGGGAGCAGGAGGGTGAGGGCGAGGTGGAGGGGCAAGGAGAGGTGGAAATCGAGAGCGACGAAGATGCCGAGCCTGACCATGAGAACGAGGGCAAGAAGGAGCAGAGCTTGCAAGAGGTGGAGGTTGTGGAGAGGGAAGAGGAGAGCGAGGGAAGAGACTCAAATAATGATGCCAAGGACGACGGGTACAACCATGTGACATCACGATTGCCTGGCATTGTTGCGGTTGAGGTAACTGGTAGACCTGAAGTTCCCTTCCATCCTGAAAGAGAGGTAGATCCTAGTAAGAGACCATTGATGGATTATGTTCAGAAGATTCAGAGGGATGTTAATGCTAACATGCGCGATGTTCTTGTGGATTGGTTGGTTTTTGTCGTTGAATATTTTGTCGAGGCAGAGGTTGCAATTGTTGGGGTTGCTTCAATGCTCATTGCTTCGAAATACGAAGAGATTAAGCCGCCCGAGGTGGAGGATTTTTGTTACATTACGGATAACACATACTCTAAGGAAGAGGTTGTGAACATGGAGGCTGAAATATTGAAGGCTTTGAAATTTGAATTGGGTGGTCCTATAGTGAAGACATTCTTGAGGTGTGTTTCTTTGTTGAATCTATGTCCATGTTGTGTTAATTTCGCTTGTTCTAGTTATTTTTGCCTTGGCATTTTGGCTCATCACTTGTATGCTTTTGCCTTCTTGTTTGCAGGAGATTCTTGA 717 0.4589 MGEQEGEGEVEGQGEVEIESDEDAEPDHENEGKKEQSLQEVEVVEREEESEGRDSNNDAKDDGYNHVTSRLPGIVAVEVTGRPEVPFHPEREVDPSKRPLMDYVQKIQRDVNANMRDVLVDWLVFVVEYFVEAEVAIVGVASMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEAEILKALKFELGGPIVKTFLRCVSLLNLCPCCVNFACSSYFCLGILAHHLYAFAFLFAGDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02061 238 MobiDBLite consensus disorder prediction 1 67 - -
Gma17g02061 238 SUPERFAMILY Cyclin-like 91 188 IPR036915 -
Gma17g02061 238 Gene3D - 134 189 - -
Gma17g02061 238 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 135 213 - -
Gma17g02061 238 MobiDBLite consensus disorder prediction 27 65 - -
Gma17g02061 238 Pfam Cyclin, N-terminal domain 134 188 IPR006671 -
Gma17g02061 238 CDD CYCLIN 115 181 IPR013763 -
Gma17g02061 238 Gene3D - 190 219 - -
Gma17g02061 238 PANTHER CYCLINS 92 129 IPR039361 -
Gma17g02061 238 PANTHER CYCLINS 135 213 IPR039361 -
Gma17g02061 238 MobiDBLite consensus disorder prediction 1 26 - -
Gma17g02061 238 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 92 129 - -
Gma17g02061 238 SMART cyclin_7 98 182 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02061 Gma-Chr17 37547438 37550922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02061 87 230 Core Cell Cycle Gene Families AT5G43080 44.910 2.83e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02061 K06627 - gmx:102660622 420.624