Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02047 ATGGCAGCAAAGAGTACCTTCCTCTTGCCAGGGTGGCTTTCCGGGACAACTCCTCTAAGTATTACATTAATGAccgcacaagtaacccgcacaagtaacTTTACAGAAGTTACGAAGAAACTAAAAGGGAAAGGTGTTGACCTTGACAATAACAGGTTTCTTATTCTTCAGGGTGAAGTTGAGCAGATTTCACTTATGAAACCAAAAGCTCAAGGGCCTCATGATGAAGTTGAAACTGAGAAATATCGCTCTGAGCTTGCTAAAGTTCGTGCTGAGCTTGAACCTTGGGAAAAAGATTTGATTGAGCACAATGGAAAACTTGAAGTTGCATGTACAGTGGCTAAGCTTCTAAATGATAAGCATGAAGGTGCTTCTCAAGCCTTTGAAGATGCTCAAAAGCAGACGAAAATCATATCAGAAACAATTAAATCAAAAACTGCCAGCATTTGTCAAATCAATAGTGATATAGAAAAGAGGAAGCATGAAGGAATATATGGTCGCATGGGTGATTTAGGTGCTATTGATGACACAGATGATGACAGTCACGGGACTTCTAAAAGGGCTCGAACTTATTTCAGTTCTCGTGTACAAAGTGATGATGATCTCGATGGGATGCACCAAACTGGGAACGATCAAGATGATGATAAATTTGACGATGAAGCCGCGGAGATGCATCAAGTTCAAGGAACACTTCAAGAGTGGGTTATAAGAGATGAAATACTTCCTCAAGAGCTACCGAAGAAGTACATTACATATGCCAAGTTGAATATTTCTCCACGTTTAGATGATCTCAAAATGGTTAAAGATGAACTGTCAGAAACCTATGTTGAACTGCAGAGGAAATCTTCATATGGACAAGGAGTCCATATCGCCATAAGACACCTTGAATCAATGATAAGGATGTCTGAAGCTCATGCAAGAATGCATCTCAAACAACATGTTACACAAGAAAATGCTGACATGGCAATTCGTGTTCTACTTTAA 984 0.3841 MAAKSTFLLPGWLSGTTPLSITLMTAQVTRTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEVETEKYRSELAKVRAELEPWEKDLIEHNGKLEVACTVAKLLNDKHEGASQAFEDAQKQTKIISETIKSKTASICQINSDIEKRKHEGIYGRMGDLGAIDDTDDDSHGTSKRARTYFSSRVQSDDDLDGMHQTGNDQDDDKFDDEAAEMHQVQGTLQEWVIRDEILPQELPKKYITYAKLNISPRLDDLKMVKDELSETYVELQRKSSYGQGVHIAIRHLESMIRMSEAHARMHLKQHVTQENADMAIRVLL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02047 327 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 240 327 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma17g02047 327 PANTHER DNA HELICASE 240 327 - -
Gma17g02047 327 MobiDBLite consensus disorder prediction 171 216 - -
Gma17g02047 327 Coils Coil 114 134 - -
Gma17g02047 327 Gene3D - 188 327 IPR027417 -
Gma17g02047 327 MobiDBLite consensus disorder prediction 193 216 - -
Gma17g02047 327 Gene3D - 20 140 IPR027417 -
Gma17g02047 327 Coils Coil 261 281 - -
Gma17g02047 327 Pfam MCM AAA-lid domain 247 326 IPR041562 -
Gma17g02047 327 SMART mcm 17 327 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma17g02047 327 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02047 Gma-Chr17 37288488 37298467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02047 239 327 Core DNA Replication Machinery Family AT1G44900 62.921 3.00e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02047 K02540 K06675 gmx:100778712 163.31