Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02045 ATGTGCAAGAGGGGACATGAGATAGATGAGACTTGTAGATTCAGCTACAAACTCACAATTTTGAGTGATCTCTCCTGTGTTTTATTTGAGTTCACCCAGAAATGGTTCCACAACCGATTCAACTCAATTTGCAGTGCAGATGCTGATGTTCGTTTGGCAAGAAGAATTAGGCGTGACACTAGCGAGAAGGGTCGGGATATTGGAGCAGTTCTTGACCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCCACAAAGAAGTATGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGGTTTGACTGTACAACATATCCGTACAAAGCTTGGTAAGCATGACTTGTGTAACATATATCCTAATTTGTATGTCATTCAGCCAACTTTTCAAgaaggtgtaagagctggtgtctcgctaagtaaggtcagtgcgcttagcgagtatcatccgttaagcgaggcatcagctcgcttagcaagtcaaaggtatcttgaaggaaatttggcacgcattcaccctcccagtgcgccatcagctcgcacagcgagtcgtttatctcttctgacgcttagcgcgcctggctcgctaagccaaa 619 0.2682 MCKRGHEIDETCRFSYKLTILSDLSCVLFEFTQKWFHNRFNSICSADADVRLARRIRRDTSEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIGLTVQHIRTKLGKHDLCNIYPNLYVIQPTFQEGVRAGVSLSKVSALSEYHPLSEASARLASQRYLEGNLARIHPPSAPSARTASRLSLLTLSAPGSLSQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02045 206 Pfam Phosphoribulokinase / Uridine kinase family 46 105 IPR006083 GO:0005524|GO:0016301
Gma17g02045 206 PANTHER URIDINE KINASE-LIKE PROTEIN 5 45 156 - -
Gma17g02045 206 PANTHER URIDINE KINASE 45 156 - -
Gma17g02045 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 107 IPR027417 -
Gma17g02045 206 Gene3D - 15 130 IPR027417 -
Gma17g02045 206 PRINTS Uridine kinase signature 49 59 - -
Gma17g02045 206 PRINTS Uridine kinase signature 85 98 - -
Gma17g02045 206 PRINTS Uridine kinase signature 63 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02045 Gma-Chr17 37130683 37132514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02045 44 138 PRT Gene Family AT1G55810 86.316 4.58e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02045 K00876 - jre:108994838 178.718