Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02039 ATGAGAAGGTATTTGCACCATGAAGCAAATCCTCACATCATTCATAGAGACATAAAGGTAAGCAATGTTCTTTTAGACACTGAATTTGAAGCCAAGGTTGCTGATTTCGGTTTTGCTAAGTTGATACCAGAAGGTGGGAAGGTTTCTGGGTGCTGTGATGTTTACAGTTTTGGGATTTTGCTTTTGGAGATTGTGAGTGCCAAGAAACCAATTGAGAAACTCCCTGGTGGAGTGAAAAGGGACATAGTTCAATGGGTCACACCACATGTCCAAAAGGGTAACTTCATTCATATTGCTCATCCAAAGTTGAAGGGGCATTTTGATTTAGAGCAATTGAAATTTGTGGTCATGATATCTATGAGGTGCACAGATAATAGCCCAGAGAAGAGGCCTAGCATGCAAGAGGTGGTGGAGTGGCTCAAGGGTGTATGTGTCATTGTCTATGATTACATGCCCTATCTAGAATACGATTGA 474 0.4135 MRRYLHHEANPHIIHRDIKVSNVLLDTEFEAKVADFGFAKLIPEGGKVSGCCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPHVQKGNFIHIAHPKLKGHFDLEQLKFVVMISMRCTDNSPEKRPSMQEVVEWLKGVCVIVYDYMPYLEYD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02039 157 PANTHER OS01G0253100 PROTEIN 46 142 IPR045271 GO:0004714|GO:0006468
Gma17g02039 157 PANTHER OS01G0253100 PROTEIN 4 45 IPR045271 GO:0004714|GO:0006468
Gma17g02039 157 Pfam Protein tyrosine and serine/threonine kinase 48 139 IPR001245 GO:0004672|GO:0006468
Gma17g02039 157 Pfam Protein kinase domain 3 47 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02039 157 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 46 142 - -
Gma17g02039 157 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 45 - -
Gma17g02039 157 Gene3D Transferase(Phosphotransferase) domain 1 2 46 - -
Gma17g02039 157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 13 25 IPR008271 GO:0004672|GO:0006468
Gma17g02039 157 Gene3D Transferase(Phosphotransferase) domain 1 47 147 - -
Gma17g02039 157 SUPERFAMILY Protein kinase-like (PK-like) 4 148 IPR011009 -
Gma17g02039 157 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02039 Gma-Chr17 36981505 36982447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02039 4 141 Receptor kinase-like Gene Family AT3G55550 36.250 1.15e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gma17g02039 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02039 - - gmx:100817283 266.159