Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02030 ATGGCTGCTTCCGCCGCACTCGACGATGCCAAGCACGGCTTCTCTCGATCGAAGATGTACAAGGAAAACCTTGCCGGCACCTTGGACGCCTACGaccgccacgtgttcctctgctacaagagccacctctcctggccaccgcgtctcgaggcctctgatgccgatcctcttcccatgcgcgtcaccaccgtctggagagctcgcaaaaatgacatcaccgtcaagGCTCGAAGGAAAAAGATCAGTGAAAGGATGAAAATTCTTCAGGATTTGTTCCCTGGTTTTAATAAGGTTATTGGGAAATCATTAGTCCTTGATGAGATAATTAATTATATTCAATCTCTTCAGCGCCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGTAGTGAATTCAAGACTTAACTCTGGTATTGAAGCGTTTCCTCCTAAAGATGTAAGTCTTAAACATCCCTTGCTTCTTACATTGAATTTCTGA 474 0.2975 MAASAALDDAKHGFSRSKMYKENLAGTLDAYDRHVFLCYKSHLSWPPRLEASDADPLPMRVTTVWRARKNDITVKARRKKISERMKILQDLFPGFNKVIGKSLVLDEIINYIQSLQRQVEFLSMKLEVVNSRLNSGIEAFPPKDVSLKHPLLLTLNF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02030 157 Gene3D - 66 138 IPR036638 GO:0046983
Gma17g02030 157 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 115 IPR011598 GO:0046983
Gma17g02030 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 132 IPR036638 GO:0046983
Gma17g02030 157 PANTHER BNAC05G07950D PROTEIN 74 147 - -
Gma17g02030 157 Coils Coil 112 132 - -
Gma17g02030 157 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 147 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02030 Gma-Chr17 36475012 36476238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02030 66 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 75.581 2.74e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02030 - - gsj:114400628 147.517