Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02016 ATGTCTAAAGAAGTTATTGCTACTCAATCACCTGCTCCTTTTGAGTATGAGATCTTGGATAGCGATGCTGAAGTCCTTAGAACTGTTAGAGCCTCATCGAATCACACGAATCCATGGATTGAACCTGGAAGGTTGAAACTTAGACACAGAATTGGCCGAGGCCCCTTTGGTGATGTCTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAAAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATTTCCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAATGGGTGACAAGATGGCAGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTCCTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGGATCTTCATTCTGAACCTTAAACCTTTTAATGTTCTTCTCAATGGTAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCATAAGCTCGGACATGGCTAAGAGGTTTGGAACTCCCAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCTTTTGAAACAGATTCTTGGGGATTCGGTTGCACCATTGTCGAAATGTTGACCGGTAATCAACCTTGGTATGGATGTCCTGTTGGCAGAATATACCAGTCTGTTGTTGAAAAGCATGAAAAACCCAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATGTCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAACTGACCAATAATCATGGAGAATGGAGATATCAAGGAAATGGGAAAGTTATTCCAAAATCAGGTAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGCGACGTGGTCCGATCTAGAAAGCCTTCCAATGCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTCGTTGGTTTAGAGCGAAATGCAGATCACGGATTCGCCCTCGTGAGGGTCCATGGAATTCATGACCCTGTTAAAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTAGTAGCTGGTGATTGGGTCCGCCTGAGGGATGAAAATGAGAAACACTCACTGGTGGGCATTCTACATGCCGTCAATCGCGATGGTAGAGTGGCTGTTGGATTTCTCGGGCTGCAAACTCTCTGGAATGGAAACTCTTCGGAACTCGAAATCGCGGAATCATACTGCATCGGCCAGTTTGTCAGGCTCAAAGACAGCCTTTCAAGTCCTCGATTCGAATGGCGTCGCAAAAGGGGAGGAGCCTCGGCCGCTGGCAGGATTTCATGGATTCTACCAAATGGATGCTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTCGGAAATGAACCAAGCACCTACTTGGCTGATCCCTCCGAGGTGGAAGTGGTTGAGTTCAAGACATGTCCTGGAATGATAGAGAAGTACCAACATGTAGAGGATCATCACTGGGCAATTAGGCCTGTTCTAATTGCAATTGGTCTATTCACTGCTCTCAAACTAGGCATATCAGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTAACTGCAATAGAAACTGAAACTCAATATCTTGATGGTCAAAATCAAAATGCTGCCACCTCTGCTACAACTACAACTACTACAAAGAAACCTTCCACTTCCAGTGCTACAATACCAGTTAGCTCAATGTGGGTTCCTGCAGTTGCTAATATGATTTTTAAGGAAAGTGTTACCTCGTCCAATGGTCGGTAG 1950 0.4379 MSKEVIATQSPAPFEYEILDSDAEVLRTVRASSNHTNPWIEPGRLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIKEDHVKIVLEKFNELYFKCQGVASISWLHGISVLNGRICIIMNLYEGSMGDKMAGLKEGRISLHDVLRYGINLAQGVQELHSKGIFILNLKPFNVLLNGNDQAILGDVGIPSLLLGSSFISSDMAKRFGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGRIYQSVVEKHEKPNIPSGLPSSVENVLSGCFEYDLRNRPLMVDILSVFQSALNELTNNHGEWRYQGNGKVIPKSGSTGYTEWFLSKDHLQVGDVVRSRKPSNACRPQNMDIPEGTVVGLERNADHGFALVRVHGIHDPVKIHMSTLERVTFGLVAGDWVRLRDENEKHSLVGILHAVNRDGRVAVGFLGLQTLWNGNSSELEIAESYCIGQFVRLKDSLSSPRFEWRRKRGGASAAGRISWILPNGCLVVKFPGMLPFGNEPSTYLADPSEVEVVEFKTCPGMIEKYQHVEDHHWAIRPVLIAIGLFTALKLGISVGKKVRRNNKVTAIETETQYLDGQNQNAATSATTTTTTKKPSTSSATIPVSSMWVPAVANMIFKESVTSSNGR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02016 649 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Gma17g02016 649 Gene3D Transferase(Phosphotransferase) domain 1 131 335 - -
Gma17g02016 649 PANTHER OS06G0639500 PROTEIN 1 645 - -
Gma17g02016 649 SUPERFAMILY Protein kinase-like (PK-like) 42 310 IPR011009 -
Gma17g02016 649 Gene3D Phosphorylase Kinase; domain 1 21 128 - -
Gma17g02016 649 MobiDBLite consensus disorder prediction 601 623 - -
Gma17g02016 649 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02016 649 PANTHER OS06G0639500 PROTEIN 1 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02016 Gma-Chr17 36122519 36129620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02016 29 316 MAP Kinase Kinase Kinase AT2G17700 23.973 5.33e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Gma17g02016 PK_Tyr_Ser-Thr 2.1e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02016 17 36122519 36129620 Gma17g02016 17 36122519 36129620 ECH
Gma14g01091 14 14541575 14545981 Gma17g02016 17 36122519 36129620 ECH
Gma17g02016 17 36122519 36129620 Gma14g01091 14 14541575 14545981 GST
Gma17g02016 17 36122519 36129620 Gma04g00610 04 5584056 5588264 PCT
Gma17g02016 17 36122519 36129620 Gma06g00595 06 5396387 5399468 PCT
Gma04g00610 04 5584056 5588264 Gma17g02016 17 36122519 36129620 PCT
Gma06g00595 06 5396387 5399468 Gma17g02016 17 36122519 36129620 PCT