Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02011 ATGGGAAGACAGTGGTCTCTCTTCAGTGCCATGGATACCCTCTTGTTGTGTATCCTTCTTTCTTCTGAAGTTGTTTTGACTAGTTATCAAAACGTTGGCAAAGTTTATCCGGGAATTGAAGGTTCTCAAATGAATTGGATTGACAGGTATGGAATTTTGCTTGAGTCATATAATGGAGAATTTGGCTTTGGTTTGGTCACCACTGCAAATGACTCCACATTGTTTCTACTAGCAATAGTCCACATGCACACCCCCAAGTTGGTTTGGGTTGCAAATAGGGAACTTCCTGTTTCCAATTCTGATAAATTTGTGTTTGATGAGAAGGGCAATGTCATTTTGCATAAAGGAGAAAGTGTGGTGTGGTCTACATATACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGAAGGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGAGTGATTTGGCAAAGTTTCAGCCACCCTACAGATACCTTGTTGCcaatgcaagatttcattgagggaatgaaacttgtcagtgaaCCTGGTCCTAACAACTTGACCTATGTTCTTGAGATTGAATCTGGCAGTGTCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGAAGGATAGCCGCAAAAAAATTGTCAACAAAAATGGTGATGTGGTGGCTTCAGCTACTCTTGATGCAAACTCCTGGAGGTTCTATGATGAGACTAAATCCTTGTTGTGGGAATTGGATTTTGCTGAAGAATCAGATGCAAATGCCACTTGGATTGCAGTTTTGGGAAGTGATGGCTTCATCACTTTCTCCAATCTTCTAAGTGGAGGGTCAATTGTTGCTTCACCAACAAGAATACCACAAGATTCTTGCAGCACTCCAGAACCTTGTGATCCCTATAACATATGCAGTGGTGAAAAAAAGTGCACCTGCCCTTCTGTTCTTAGCTCTAGGCCTAATTGCAAACCCGGGTTTGTCTCTCCTTGCAACTCAAAAAGCACCATTGAGCTTGTAAAAGCTGATGATAGACTCAATTACTTTGCACTTGGGTTTGTTCCACCCTCTTCAAAGACTGATTTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCTATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTGTTTGACAGGATTGGAAGCTTTGAGAAATCTGACAAAGATTCGGGTTTAGTGTCCTATATTAAGGTGGTATCTAGTGAAGGAGACACTAGAGACAGTGGAAGCAGCAAAATGCAGACAATAGTTGTTGTGATCATTGTCATAGTAACATTGTTTGTCATTTCTGGTATGCTATTCGTGGCACATAGATGCTTCAGGAAAAAGGAAGATTTGCTTGAGTCTCCTCAAGAGGATTCAGAAGATGACAGTTTCTTGGAGAGTTTAACTGGCATGCCAATCCGTTACAGCTACACTGATCTAGAAACTGCAACAAGTAACTTCTCTGTGAGGCTTGGAGAAGGGGGTTTCGGTTCAGTATATAAAGGAGTTCTACCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCAGAGTTGAAGTAAGCATTATAGGGAGCATTCATCACCACCATTTGGTAAGGCTTAAAGGTTTCTGTGCTGAAGGGTCTCATAGAGTTCTTGCTTATGAGTACATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTGTGACTCAAAGATTATTCATTGTGACATCAAACCAGAAAATGTGCTCCTAGATGATAATTTCAGGGTCAAGGTTTCTGATTTTGGTTTGGCTAAGCTCATGACACGTGAGCAAAGCCATGTTTTCACAACACTTAGAGGCACTAGAGGGTATCTTGCACCTGAGTGGATCACAAACTGTTCCATATCAGAGAAAAGTGATGTTTATAGCTATGGTATGGTGTTGCTGGAGATCATTGGGGGGAGGAAAAACTATGATCCCAGTGAAACTTCAGAGAAATCTCATTTCCCATCTTTTGCTTTTAAGATGGTGGAAGAAGGGAATGTGAGAGAGATTCTTGACTCAAAGGTGGAAACTTATGAAAATGATGAAAGGGTTCACATTGCTGTGAATGTTGCATTGTGGTGCATACAGGAAGACATGTCTCTTAGGCCTTCCATGACCAAAGTTGTTCAAATGTTAGAGGGTCTATGCACTGTTCATAAGCCACCAACTTGTTCTGTCCTAGGTTCTCGGTTTTATTCTACTAGTGAGGTTGGCACTTCTTCAGGGCCATCAGATTGTAACAGTGAAGCCAATCTTTCTGCTGTTAGGCTTTCAGGGCCAAGATAA 2439 0.4071 MGRQWSLFSAMDTLLLCILLSSEVVLTSYQNVGKVYPGIEGSQMNWIDRYGILLESYNGEFGFGLVTTANDSTLFLLAIVHMHTPKLVWVANRELPVSNSDKFVFDEKGNVILHKGESVVWSTYTSGKGVSSMELKDTGNLVLLGNDSRVIWQSFSHPTDTLLPMQDFIEGMKLVSEPGPNNLTYVLEIESGSVILSTGLQTPQPYWSMKKDSRKKIVNKNGDVVASATLDANSWRFYDETKSLLWELDFAEESDANATWIAVLGSDGFITFSNLLSGGSIVASPTRIPQDSCSTPEPCDPYNICSGEKKCTCPSVLSSRPNCKPGFVSPCNSKSTIELVKADDRLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAMFFNSSSGNCFLFDRIGSFEKSDKDSGLVSYIKVVSSEGDTRDSGSSKMQTIVVVIIVIVTLFVISGMLFVAHRCFRKKEDLLESPQEDSEDDSFLESLTGMPIRYSYTDLETATSNFSVRLGEGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHRVLAYEYMANGSLDKWIFNKNKEEFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFRVKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNCSISEKSDVYSYGMVLLEIIGGRKNYDPSETSEKSHFPSFAFKMVEEGNVREILDSKVETYENDERVHIAVNVALWCIQEDMSLRPSMTKVVQMLEGLCTVHKPPTCSVLGSRFYSTSEVGTSSGPSDCNSEANLSAVRLSGPR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02011 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 209 IPR036426 -
Gma17g02011 812 Gene3D Transferase(Phosphotransferase) domain 1 568 774 - -
Gma17g02011 812 Pfam Protein kinase domain 497 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02011 812 MobiDBLite consensus disorder prediction 789 805 - -
Gma17g02011 812 CDD STKc_IRAK 499 766 - -
Gma17g02011 812 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Gma17g02011 812 PIRSF SRK 8 810 IPR024171 GO:0004674
Gma17g02011 812 MobiDBLite consensus disorder prediction 789 812 - -
Gma17g02011 812 CDD B_lectin 54 158 IPR001480 -
Gma17g02011 812 Gene3D - 50 157 IPR036426 -
Gma17g02011 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 812 - -
Gma17g02011 812 SUPERFAMILY Protein kinase-like (PK-like) 471 764 IPR011009 -
Gma17g02011 812 SMART blect_4 45 158 IPR001480 -
Gma17g02011 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Gma17g02011 812 Pfam D-mannose binding lectin 87 167 IPR001480 -
Gma17g02011 812 SMART serkin_6 493 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02011 812 Gene3D Phosphorylase Kinase; domain 1 460 567 - -
Gma17g02011 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 812 - -
Gma17g02011 812 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02011 812 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02011 Gma-Chr17 36066057 36068495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02011 420 773 Receptor kinase-like Gene Family AT5G20050 43.182 8.19e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma17g02011 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02011 - - gmx:100787500 1638.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02011 17 36066057 36068495 Gma17g02011 17 36066057 36068495 ECH
Gma14g01096 14 14679902 14682334 Gma17g02011 17 36066057 36068495 ECH
Gma15g00078 15 656600 659548 Gma17g02011 17 36066057 36068495 ECH
Gma17g02011 17 36066057 36068495 Gma14g01096 14 14679902 14682334 GST
Gma17g02011 17 36066057 36068495 Gma04g00618 04 5653411 5658391 PCT
Gma17g02011 17 36066057 36068495 Gma06g00603 06 5466232 5468685 PCT
Gma04g00618 04 5653411 5658391 Gma17g02011 17 36066057 36068495 PCT
Gma06g00603 06 5466232 5468685 Gma17g02011 17 36066057 36068495 PCT